RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CCDC88CQ9P219 2028 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A0G2JPF8 293 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A1B0GUH1 482 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC22A23A1A5C7 686 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 TRABD2BA6NFA1 517 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 NAP1L6A6NFF2 107 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 ANKRD61A6NGH8 418 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC9B1P1A6NJY1 282 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 HNRNPCL3B7ZW38 293 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 EMC8O43402 210 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 PLPP2O43688 288 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 B4GALT2O60909 372 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 AGR2O95994 175 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SYPP08247 313 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 FGF2P09038 288 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 GIPP09681 153 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC35G6P0C7Q6 338 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 HNRNPCL4P0DMR1 293 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SAGP10523 405 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 PEBP1P30086 187 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 ATP6V1E1P36543 226 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 CAPZA2P47755 286 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SELENOPP49908 381 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 CCR6P51684 374 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 RAB8AP61006 207 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SYPL1Q16563 259 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 SHEQ5VZ18 495 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 IL20RBQ6UXL0 311 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 CFAP77Q6ZQR2 320 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 KANSL1Q7Z3B3 1105 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 COMTD1Q86VU5 262 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 GID4Q8IVV7 300 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 ACBD7Q8N6N7 88 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 DACT3Q96B18 629 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 NRTNQ99748 197 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 PINK1Q9BXM7 581 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 AICDAQ9GZX7 198 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 TRIM36Q9NQ86 728 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 INPP5EQ9NRR6 644 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 TRPC4Q9UBN4 977 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 TBC1D29Q9UFV1 150 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 ENTPD2Q9Y5L3 495 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 HRH3Q9Y5N1 445 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF780BQ9Y6R6 833 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 PIAS3Q9Y6X2 628 aa10.01□□□□□ -0.81
CHRNA1-201ENST00000261007 MYO10Q9HD67 2058 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A1W2PR48 441 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 PRAMEF27A3QJZ7 478 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 POM121BA6NF01 834 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 L7N2F9 121 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 SYT5O00445 386 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 PGRMC2O15173 223 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 TNFSF14O43557 240 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 AIFM1O95831 613 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 EPPINO95925 133 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 HPXP02790 462 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 ASGR2P07307 311 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 NMBP08949 121 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 CD3GP09693 182 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 F3P13726 295 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
CHRNA1-201ENST00000261007 CPN1P15169 458 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 FPR3P25089 353 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 BUD31P41223 144 aaPredicted RBP10□□□□□ -0.81
CHRNA1-201ENST00000261007 ACTR1BP42025 376 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 OMPP47874 163 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 TAS2R43P59537 309 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 ACTR1AP61163 376 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 RAP2BP61225 183 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 PGGHGQ32M88 737 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 ELFN2Q5R3F8 820 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 PXKQ7Z7A4 578 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 NAXDQ8IW45 347 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 OR5T2Q8NGG2 359 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 OR4Q3Q8NH05 313 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 MOSPD2Q8NHP6 518 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 PIGXQ8TBF5 258 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 SCARB1Q8WTV0 552 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 IFT27Q9BW83 186 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 MFRPQ9BY79 579 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 C20orf85Q9H1P6 137 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC6A17Q9H1V8 727 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 KLHL31Q9H511 634 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 ZCCHC4Q9H5U6 513 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 PLEKHA1Q9HB21 404 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 BRD7Q9NPI1 651 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 SPHK1Q9NYA1 384 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 AKAP7Q9P0M2 348 aaPredicted RBP10□□□□□ -0.81
CHRNA1-201ENST00000261007 C5AR2Q9P296 337 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 ATPIF1Q9UII2 106 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF175Q9Y473 711 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 KLF2Q9Y5W3 355 aaPredicted RBP10□□□□□ -0.81
CHRNA1-201ENST00000261007 COL4A2P08572 1712 aa10□□□□□ -0.81
CHRNA1-201ENST00000261007 DUXAA6NLW8 204 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 OR5K4A6NMS3 321 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 AIPO00170 330 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 DVL2O14641 736 aa9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 ERAL1O75616 437 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-201ENST00000261007 SC5DO75845 299 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms