RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SERINC1Q9NRX5 453 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 ACER3Q9NUN7 267 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 HAO1Q9UJM8 370 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 E9PBE3 544 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 CYTIPO60759 359 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 LYZL6O75951 148 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 AGR2O95994 175 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 FESP07332 822 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 TFPIP10646 304 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 CHRNEQ04844 493 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 GPAT3Q53EU6 434 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 TNFAIP8L3Q5GJ75 292 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 FRRS1Q6ZNA5 592 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 ZNF611Q8N823 705 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 LILRB1Q8NHL6 650 aaPredicted RBP16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 ZNF563Q8TA94 476 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 TMEM234Q8WY98 164 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 NEURL3Q96EH8 262 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 MEAF6Q9HAF1 191 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 CTPS2Q9NRF8 586 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 LAMP3Q9UQV4 416 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 JMJD1CQ15652 2540 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 SULT2B1O00204 365 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 HEXAP06865 529 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 OR3A2P47893 321 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 KHKP50053 298 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 CLNS1AP54105 237 aaKnown RBP16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 ITGADQ13349 1161 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 SYT14P1Q58G82 188 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 TMPPEQ6ZT21 453 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 BHLHA15Q7RTS1 189 aaPredicted RBP16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 RNF130Q86XS8 419 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 FAM71CQ8NEG0 241 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 ZNF75CPQ92670 426 aaPredicted RBP16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 INPP5KQ9BT40 448 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 BDH2Q9BUT1 245 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 SAP130Q9H0E3 1048 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 WDR55Q9H6Y2 383 aaPredicted RBP16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 RNF115Q9Y4L5 304 aa16.85■□□□□ 0.29
TM6SF1-201ENST00000258909 GOLGA8QA0A0J9YX86 632 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 GOLGA8OA6NCC3 632 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 GOLGA8NF8WBI6 632 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 HMGN4O00479 90 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 SDHDO14521 159 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 ADAM11O75078 769 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 SNUPNO95149 360 aaKnown RBP16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 GSNP06396 782 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 CCNA2P20248 432 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 IL12AP29459 219 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 CDKN2CP42773 168 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 PLAURQ03405 335 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 P2RY6Q15077 328 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 STK11Q15831 433 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 SYPL1Q16563 259 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 DPY19L1Q2PZI1 675 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 NCMAPQ5T1S8 102 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 HHATQ5VTY9 493 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 Q6ZT83 130 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 ANKFN1Q8N957 763 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 HSD17B8Q92506 261 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 ARL5BQ96KC2 179 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 CCDC115Q96NT0 180 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 CCDC106Q9BWC9 280 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 AIG1Q9NVV5 245 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 RAB21Q9UL25 225 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 SLC35A3Q9Y2D2 325 aa16.84■□□□□ 0.29
TM6SF1-201ENST00000258909 ABCA2Q9BZC7 2435 aa16.83■□□□□ 0.29
TM6SF1-201ENST00000258909 CCDC154A6NI56 674 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 CNOT4O95628 575 aaKnown RBP16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 IGHV3-9P01782 118 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 CD3EP07766 207 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 EPHA3P29320 983 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 ATP5J2P56134 94 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 KCNJ10P78508 379 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 HPCAP84074 193 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 PNPT1Q8TCS8 783 aaKnown RBP16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 MGARPQ8TDB4 240 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 CNOT9Q92600 299 aaKnown RBP16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 PANX1Q96RD7 426 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 OR11A1Q9GZK7 315 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 CXorf56Q9H5V9 222 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 ESRP2Q9H6T0 727 aaKnown RBP16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 POLE3Q9NRF9 147 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF701Q9NV72 531 aaPredicted RBP16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 BTNL2Q9UIR0 455 aa16.83■□□□□ 0.28
TM6SF1-201ENST00000258909 AP3D1O14617 1153 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 GUSBP08236 651 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 KITP10721 976 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 APOBEC1P41238 236 aaKnown RBP16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 CSNK2A1P68400 391 aaPredicted RBP16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 BSPH1Q075Z2 132 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 OGFOD2Q6N063 350 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 SEZ6L2Q6UXD5 910 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF621Q6ZSS3 439 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 GALNT5Q7Z7M9 940 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF100Q8IYN0 542 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 LRRC34Q8IZ02 419 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 ARFGAP2Q8N6H7 521 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms