RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 C9JVG2 144 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 SULT2B1O00204 365 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 TM9SF1O15321 606 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 FKBP2P26885 142 aaKnown RBP18.66■□□□□ 0.58
NEDD8-201ENST00000250495 APOBEC1P41238 236 aaKnown RBP18.66■□□□□ 0.58
NEDD8-201ENST00000250495 SLC1A6P48664 564 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 DIO1P49895 249 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 CASP9P55211 416 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 PPP2R2BQ00005 443 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 DPY19L1Q2PZI1 675 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 OLIG3Q7RTU3 272 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 ANKRD46Q86W74 232 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF100Q8IYN0 542 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 LRRC34Q8IZ02 419 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF619Q8N2I2 560 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF563Q8TA94 476 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 SMAP2Q8WU79 429 aaPredicted RBP18.66■□□□□ 0.58
NEDD8-201ENST00000250495 TESCQ96BS2 214 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF775Q96BV0 537 aaPredicted RBP18.66■□□□□ 0.58
NEDD8-201ENST00000250495 MUCL1Q96DR8 90 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 SAP130Q9H0E3 1048 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 MED4Q9NPJ6 270 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 PRSS50Q9UI38 385 aa18.66■□□□□ 0.58
NEDD8-201ENST00000250495 CENPVL1A0A0U1RR11 272 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 OVOL3O00110 214 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 ANKRD28O15084 1053 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 KIAA0513O60268 411 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 LBPP18428 481 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 PCSK6P29122 969 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 PGM1P36871 562 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 CLNS1AP54105 237 aaKnown RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 PHC1P78364 1004 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 ETFDHQ16134 617 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 MAPK14Q16539 360 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 SYT14P1Q58G82 188 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 TYW3Q6IPR3 259 aaKnown RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 TNFAIP8L2Q6P589 184 aaPredicted RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 DNAJC14Q6Y2X3 702 aaPredicted RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 MTDHQ86UE4 582 aaKnown RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 P2RY8Q86VZ1 359 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF75CPQ92670 426 aaPredicted RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 RAB8BQ92930 207 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 ROPN1LQ96C74 230 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 ZHX1-C8orf76Q96EF9 292 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 ZNF300Q96RE9 604 aaPredicted RBP18.65■□□□□ 0.58
NEDD8-201ENST00000250495 EMC3Q9P0I2 261 aa18.65■□□□□ 0.58
NEDD8-201ENST00000250495 CADP27708 2225 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 DPRXA6NFQ7 191 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 LYZL6O75951 148 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 DANCRP0C864 163 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 TFPIP10646 304 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 IDUAP35475 653 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 CBX1P83916 185 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 BSPH1Q075Z2 132 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 PDK3Q15120 406 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 PPA1Q15181 289 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 STK11Q15831 433 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 ZNF672Q499Z4 452 aaPredicted RBP18.64■□□□□ 0.57
NEDD8-201ENST00000250495 SAXO2Q658L1 398 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 FAM71CQ8NEG0 241 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 GTPBP3Q969Y2 492 aaKnown RBP18.64■□□□□ 0.57
NEDD8-201ENST00000250495 NEURL3Q96EH8 262 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 C20orf27Q9GZN8 174 aa18.64■□□□□ 0.57
NEDD8-201ENST00000250495 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.64■□□□□ 0.57
NEDD8-201ENST00000250495 A0A1W2PP18 115 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 SOD3P08294 240 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 DHRS4L1P0CG22 281 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 GGT1P19440 569 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 S100A3P33764 101 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 RYKP34925 604 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 CHI3L1P36222 383 aaPredicted RBP18.63■□□□□ 0.57
NEDD8-201ENST00000250495 CLK1P49759 484 aaKnown RBP18.63■□□□□ 0.57
NEDD8-201ENST00000250495 KHKP50053 298 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 KCNJ10P78508 379 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 GABPB1Q06547 395 aaPredicted RBP18.63■□□□□ 0.57
NEDD8-201ENST00000250495 TNK1Q13470 666 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 CLEC12BQ2HXU8 276 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 GPAT3Q53EU6 434 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 TIMM23BQ5SRD1 257 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 GRINAQ7Z429 371 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 SORT1Q99523 831 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 CCDC106Q9BWC9 280 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 NUF2Q9BZD4 464 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 CTPS2Q9NRF8 586 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 MARCOQ9UEW3 520 aaPredicted RBP18.63■□□□□ 0.57
NEDD8-201ENST00000250495 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 HAO1Q9UJM8 370 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 HDGFL3Q9Y3E1 203 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 JMJD1CQ15652 2540 aa18.63■□□□□ 0.57
NEDD8-201ENST00000250495 IGKV3D-15A0A087WSY6 115 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 DNPH1O43598 174 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 PGM3O95394 542 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 IGHV1-2P23083 117 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 HPCAP84074 193 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 STX3Q13277 289 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 HSP90B2PQ58FF3 399 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 SPANXN4Q5MJ08 99 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 SEZ6L2Q6UXD5 910 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 FRRS1Q6ZNA5 592 aa18.62■□□□□ 0.57
NEDD8-201ENST00000250495 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms