RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SLC9B1P1A6NJY1 282 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 RIIAD1A6NNX1 92 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 ARSBP15848 533 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 CLDN20P56880 219 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 DLX2Q07687 328 aaPredicted RBP23.57■■□□□ 1.36
RAB40C-201ENST00000248139 SF3A2Q15428 464 aaKnown RBP23.57■■□□□ 1.36
RAB40C-201ENST00000248139 RNF113BQ8IZP6 322 aaKnown RBP23.57■■□□□ 1.36
RAB40C-201ENST00000248139 SLC44A3Q8N4M1 653 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 OR4D9Q8NGE8 314 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 OR5M3Q8NGP4 307 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 ERVMER34-1Q9H9K5 563 aa23.57■■□□□ 1.36
RAB40C-201ENST00000248139 INMT-MINDY4F8WBC2 141 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 PTP4A3O75365 173 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 HLA-DMAP28067 261 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 LYPD4Q6UWN0 246 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 TMEM92Q6UXU6 159 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 Q6ZSR6 202 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 ERMAPQ96PL5 475 aaPredicted RBP23.56■■□□□ 1.36
RAB40C-201ENST00000248139 JAM3Q9BX67 310 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 MTIF3Q9H2K0 278 aaKnown RBP23.56■■□□□ 1.36
RAB40C-201ENST00000248139 WBP1LQ9NX94 342 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 PCOLCE2Q9UKZ9 415 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 SLC35A3Q9Y2D2 325 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 ADAM18Q9Y3Q7 739 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 TRAV6A0A075B6T7 132 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 SLC22A31A6NKX4 558 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 PSMD9O00233 223 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 OR10H2O60403 315 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 SERPINI2O75830 405 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 ACSM3Q53FZ2 586 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 TRMT10AQ8TBZ6 339 aaKnown RBP23.56■■□□□ 1.36
RAB40C-201ENST00000248139 ZNF559Q9BR84 538 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 MCCC2Q9HCC0 563 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 TRPV5Q9NQA5 729 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 CYSLTR2Q9NS75 346 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 CPNE7Q9UBL6 633 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 SLC19A2O60779 497 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 PSG6Q00889 435 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 ALG10BQ5I7T1 473 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 BAHD1Q8TBE0 780 aaPredicted RBP23.56■■□□□ 1.36
RAB40C-201ENST00000248139 AHCYL2Q96HN2 611 aaKnown RBP23.56■■□□□ 1.36
RAB40C-201ENST00000248139 PGLYRP3Q96LB9 341 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 NCKAP1Q9Y2A7 1128 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 MAU2Q9Y6X3 613 aa23.56■■□□□ 1.36
RAB40C-201ENST00000248139 HEATR5AQ86XA9 2040 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 A0A0G2JK05 382 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 GALR3O60755 368 aaPredicted RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 TFP02787 698 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 ZNF10P21506 573 aaPredicted RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 OR13H1Q8NG92 308 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 ZC3HAV1LQ96H79 300 aaKnown RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 ORAI3Q9BRQ5 295 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 MARVELD1Q9BSK0 173 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 ABCG5Q9H222 651 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 HCN3Q9P1Z3 774 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 ADAM30Q9UKF2 790 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 HIST1H1CP16403 213 aaKnown RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 HNRNPA2B1P22626 353 aaKnown RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 SLC2A5P22732 501 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 FHL1Q13642 323 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 YIF1BQ5BJH7 314 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 EXOSC6Q5RKV6 272 aaKnown RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 C1QTNF12Q5T7M4 302 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 RSC1A1Q92681 617 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 CCDC3Q9BQI4 270 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 LYRM4Q9HD34 91 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 RPRD1BQ9NQG5 326 aaKnown RBP23.55■■□□□ 1.36
RAB40C-201ENST00000248139 SATB2Q9UPW6 733 aa23.55■■□□□ 1.36
RAB40C-201ENST00000248139 A0A0B4J2E0 115 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 A0A1B0GX12 115 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 C4orf47A7E2U8 309 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 PLPP2O43688 288 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SCO2O43819 266 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SNRPBP14678 240 aaKnown RBP23.54■■□□□ 1.36
RAB40C-201ENST00000248139 CTHP32929 405 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 MAGEB1P43366 347 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 FAPQ12884 760 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 FAM98AQ8NCA5 519 aaKnown RBP23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SLC28A3Q9HAS3 691 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SPACA6W5XKT8 324 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 TGFBR3LH3BV60 316 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 CD3GP09693 182 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 TALDO1P37837 337 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 MAP3K8P41279 467 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 ACAA2P42765 397 aaKnown RBP23.54■■□□□ 1.36
RAB40C-201ENST00000248139 MAT1AQ00266 395 aaKnown RBP23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SHHQ15465 462 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 BCL2L15Q5TBC7 163 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SLC37A2Q8TED4 501 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 SPACA7Q96KW9 195 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 ZFP3Q96NJ6 502 aa23.54■■□□□ 1.36
RAB40C-201ENST00000248139 A0A087WV62 115 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 FAM171A2A8MVW0 826 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 ZNF3P17036 446 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 DRD5P21918 477 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 F8A1P23610 371 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 TPMTP51580 245 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 BDH1Q02338 343 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 RFT1Q96AA3 541 aa23.53■■□□□ 1.36
RAB40C-201ENST00000248139 STACQ99469 402 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms