RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 EGLN1Q9GZT9 426 aa6.87□□□□□ -1.31
SSR1-201ENST00000244763 MCOLN1Q9GZU1 580 aa6.87□□□□□ -1.31
SSR1-201ENST00000244763 ZBP1Q9H171 429 aa6.87□□□□□ -1.31
SSR1-201ENST00000244763 RHBDD3Q9Y3P4 386 aa6.87□□□□□ -1.31
SSR1-201ENST00000244763 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
SSR1-201ENST00000244763 OR6C76A6NM76 312 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 H0YGG7 62 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 MAOAP21397 527 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 KCNJ10P78508 379 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ZNF616Q08AN1 781 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SMAD4Q13485 552 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 PCGF3Q3KNV8 242 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 MYLIPQ8WY64 445 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 METTL9Q9H1A3 318 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 MAN2C1Q9NTJ4 1040 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 MEIS3P2A8K0S8 358 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 GAPDHSO14556 408 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 HOXC11O43248 304 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 SSX5O60225 188 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 C14orf28Q4W4Y0 310 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 PLAG1Q6DJT9 500 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 PRR18Q8N4B5 295 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ASB12Q8WXK4 309 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 ST6GALNAC5Q9BVH7 336 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 TREX1Q9NSU2 369 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 HAO2Q9NYQ3 351 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 LRFN1Q9P244 771 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 GON4LQ3T8J9 2241 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 M0R3H8 397 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SLC16A7O60669 478 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 C1SP09871 688 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 CDK4P11802 303 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 GRPRP30550 384 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 PTGER4P35408 488 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 LGALS4P56470 323 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 RAB11AP62491 216 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 CHRNEQ04844 493 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 B3GNT9Q6UX72 402 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SLC46A3Q7Z3Q1 461 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 GTPBP8Q8N3Z3 284 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 OR8J2Q8NGG1 315 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 DCBLD2Q96PD2 775 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 NXF5Q9H1B4 397 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 TM7SF3Q9NS93 570 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 LHX3Q9UBR4 397 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 WDR37Q9Y2I8 494 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 A0A1W2PPV4 95 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 TMEM212A6NML5 194 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 FCGR2AP12318 317 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 PRDX3P30048 256 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 FNTBP49356 437 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 CYB561P49447 251 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 RPS23P62266 143 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 DUSP7Q16829 419 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 TMEM52BQ4KMG9 183 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ACSM3Q53FZ2 586 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 PGAP1Q75T13 922 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 CPOQ8IVL8 374 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 METTL4Q8N3J2 472 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 TXN2Q99757 166 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 DPH2Q9BQC3 489 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 NKX6-3A6NJ46 265 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 GABRR3A8MPY1 467 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 G3V2L1 256 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SUSD5O60279 629 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 MED6O75586 246 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 IFNA17P01571 189 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 F11P03951 625 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 RGS6P49758 472 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ERVFC1P60507 584 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SDR9C7Q8NEX9 313 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 PTERQ96BW5 349 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SLC39A13Q96H72 371 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 CLMPQ9H6B4 373 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 C19orf12Q9NSK7 152 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 DDX60Q8IY21 1712 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 ARGFXA6NJG6 315 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ZNF587BE7ETH6 402 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 AGAP7PQ5VUJ5 663 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 AGAP6Q5VW22 663 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 WDR5BQ86VZ2 330 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SLC25A43Q8WUT9 341 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 S100PBPQ96BU1 408 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 AGAP4Q96P64 663 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 VN1R3Q9BXE9 311 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 TEX10Q9NXF1 929 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 A0A1W2PQL4 384 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 SMIM30A4D0T7 59 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 CTNSO60931 367 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 SELEP16581 610 aa6.86□□□□□ -1.31
SSR1-201ENST00000244763 ZNF14P17017 642 aaPredicted RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 SF3A2Q15428 464 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 EXOSC6Q5RKV6 272 aaKnown RBP6.86□□□□□ -1.31
SSR1-201ENST00000244763 ZNF322Q6U7Q0 402 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms