RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 LIME1Q9H400 295 aa11.37□□□□□ -0.59
PDZD11-201ENST00000239666 ESRP2Q9H6T0 727 aaKnown RBP11.37□□□□□ -0.59
PDZD11-201ENST00000239666 RMND5AQ9H871 391 aa11.37□□□□□ -0.59
PDZD11-201ENST00000239666 EXOSC3Q9NQT5 275 aaKnown RBP11.37□□□□□ -0.59
PDZD11-201ENST00000239666 CALML5Q9NZT1 146 aa11.37□□□□□ -0.59
PDZD11-201ENST00000239666 KLHL13Q9P2N7 655 aa11.37□□□□□ -0.59
PDZD11-201ENST00000239666 MARCOQ9UEW3 520 aaPredicted RBP11.37□□□□□ -0.59
PDZD11-201ENST00000239666 GIMAP2Q9UG22 337 aa11.37□□□□□ -0.59
PDZD11-201ENST00000239666 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 C17orf51A8MQB3 221 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 GPR171O14626 319 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 NTN1O95631 604 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 CPSF4O95639 269 aaKnown RBP11.36□□□□□ -0.59
PDZD11-201ENST00000239666 CD53P19397 219 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 AGTR1P30556 359 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 ARRB2P32121 409 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 PDK3Q15120 406 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 QPRTQ15274 297 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 GSTA3Q16772 222 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 KRTAP21-3Q3LHN1 58 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 PDZK1Q5T2W1 519 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 SAXO2Q658L1 398 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 CBLN3Q6UW01 205 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 PLXDC2Q6UX71 529 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 STAC2Q6ZMT1 411 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 C8orf86Q6ZUL3 223 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 PLEKHM3Q6ZWE6 761 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 ZNF440Q8IYI8 595 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 ZNF619Q8N2I2 560 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 OR5D16Q8NGK9 328 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 RFWD2Q8NHY2 731 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 POC1BQ8TC44 478 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 CCDC115Q96NT0 180 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 TRNT1Q96Q11 434 aaKnown RBP11.36□□□□□ -0.59
PDZD11-201ENST00000239666 CCL19Q99731 98 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 SLC35A5Q9BS91 424 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 BDH2Q9BUT1 245 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 THUMPD3Q9BV44 507 aaKnown RBP11.36□□□□□ -0.59
PDZD11-201ENST00000239666 OR51I1Q9H343 314 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 CXorf56Q9H5V9 222 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 MTHFD2LQ9H903 347 aaPredicted RBP11.36□□□□□ -0.59
PDZD11-201ENST00000239666 BCO1Q9HAY6 547 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 ACER3Q9NUN7 267 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 HDGFL3Q9Y3E1 203 aa11.36□□□□□ -0.59
PDZD11-201ENST00000239666 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 ZNF724A8MTY0 619 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 DEFB108AA8MXU0 73 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 KIAA0513O60268 411 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 EIF1BO60739 113 aaKnown RBP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 UGT2B17O75795 530 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 CYP7B1O75881 506 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 PGRP06401 933 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 BGNP21810 368 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 IL32P24001 234 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 HOXC12P31275 282 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 IRX1P78414 480 aaPredicted RBP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 KCNJ10P78508 379 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 RASGEF1BQ0VAM2 473 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 BST1Q10588 318 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 SKP2Q13309 424 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 ITGADQ13349 1161 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 POU4F3Q15319 338 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 FAM174BQ3ZCQ3 159 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 TIGD2Q4W5G0 525 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 GPAT3Q53EU6 434 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 SFRP5Q5T4F7 317 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 TMPPEQ6ZT21 453 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 MSANTD1Q6ZTZ1 278 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 GRINAQ7Z429 371 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 CLECL1Q8IZS7 167 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 ARFGAP2Q8N6H7 521 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 TMEM171Q8WVE6 324 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 ROPN1LQ96C74 230 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 MUCL1Q96DR8 90 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 OTUB1Q96FW1 271 aaPredicted RBP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 C18orf12Q96KH6 178 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 PPP1R36Q96LQ0 422 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 OR52E6Q96RD3 313 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 SORT1Q99523 831 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 ACTR6Q9GZN1 396 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 TMEM185BQ9H7F4 350 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 PARPBPQ9NWS1 579 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 C6orf203Q9P0P8 240 aaPredicted RBP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 MKLN1Q9UL63 735 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 TRAPPC4Q9Y296 219 aa11.35□□□□□ -0.59
PDZD11-201ENST00000239666 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
PDZD11-201ENST00000239666 AKAP9Q99996 3911 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 FAM234BA2RU67 622 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 CCDC154A6NI56 674 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 SULT2B1O00204 365 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 FCMRO60667 390 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 CYTIPO60759 359 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 SCN2BO60939 215 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 SLC22A3O75751 556 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
PDZD11-201ENST00000239666 OR12D1P0DN82 309 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 IL7RP16871 459 aa11.34□□□□□ -0.59
PDZD11-201ENST00000239666 PAX7P23759 505 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms