RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RANBP3LQ86VV4 465 aaPredicted RBP14.35□□□□□ -0.11
DDX55-201ENST00000238146 RAB42Q8N4Z0 105 aa14.35□□□□□ -0.11
DDX55-201ENST00000238146 PIGKQ92643 395 aa14.35□□□□□ -0.11
DDX55-201ENST00000238146 LCORQ96JN0 433 aaPredicted RBP14.35□□□□□ -0.11
DDX55-201ENST00000238146 LINC00052Q96N35 136 aa14.35□□□□□ -0.11
DDX55-201ENST00000238146 APOBEC3BQ9UH17 382 aaKnown RBP14.35□□□□□ -0.11
DDX55-201ENST00000238146 PLSCR5A0PG75 271 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 RIIAD1A6NNX1 92 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 OGG1O15527 345 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 ARL6IP5O75915 188 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 RGS11O94810 467 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 CXCL14O95715 111 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 DDX6P26196 483 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX55-201ENST00000238146 RPS11P62280 158 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX55-201ENST00000238146 RIPPLY1Q0D2K3 151 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 DUSP8Q13202 625 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 DUSP5Q16690 384 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 HNRNPA1L2Q32P51 320 aaKnown RBP14.34□□□□□ -0.11
DDX55-201ENST00000238146 TMEM81Q6P7N7 255 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 LINGO2Q7L985 606 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 COL26A1Q96A83 441 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 BPIFA2Q96DR5 249 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 DERL3Q96Q80 235 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 LIN7BQ9HAP6 207 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 CACYBPQ9HB71 228 aaKnown RBP14.34□□□□□ -0.11
DDX55-201ENST00000238146 HAO2Q9NYQ3 351 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 TRAV27A0A087WT01 109 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 TBC1D3KA0A087X1G2 549 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 TBC1D3BA6NDS4 549 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 TBC1D3FA6NER0 549 aaPredicted RBP14.34□□□□□ -0.11
DDX55-201ENST00000238146 FGF18O76093 207 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 CLTBP09497 229 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 UCHL1P09936 223 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 NDUFS1P28331 727 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 GDI2P50395 445 aaKnown RBP14.34□□□□□ -0.11
DDX55-201ENST00000238146 NTHL1P78549 312 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 ARHGAP11BQ3KRB8 267 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
DDX55-201ENST00000238146 UBE2NLQ5JXB2 153 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 METTL11BQ5VVY1 283 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 TBC1D3GQ6DHY5 549 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 C3P1Q6ZMU1 363 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 TMPRSS11FQ6ZWK6 438 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 HDDC3Q8N4P3 179 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 FAM71CQ8NEG0 241 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 OR51A7Q8NH64 312 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 CD99L2Q8TCZ2 262 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 ELMOD3Q96FG2 381 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 MS4A4EQ96PG1 132 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 SDF2Q99470 211 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 SEC22CQ9BRL7 303 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 SDHAF2Q9NX18 166 aa14.34□□□□□ -0.11
DDX55-201ENST00000238146 A0A1B0GUH1 482 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 LATO43561 262 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 TSPAN9O75954 239 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ATP1B1P05026 303 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 TYRP1P17643 537 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ZP3P21754 424 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 CAPZA2P47755 286 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ACTC1P68032 377 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ACTA1P68133 377 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 SIM1P81133 766 aaPredicted RBP14.33□□□□□ -0.12
DDX55-201ENST00000238146 DHODHQ02127 395 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 CAMK1Q14012 370 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 CDK5R1Q15078 307 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 TUSC1Q2TAM9 212 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 EIPR1Q53HC9 387 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 RPL13AP3Q6NVV1 102 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 CNKSR3Q6P9H4 555 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 OR52I2Q8NH67 350 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 OR4C6Q8NH72 309 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 PXYLP1Q8TE99 480 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 OTUB2Q96DC9 234 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 SMIM19Q96E16 107 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 PELI1Q96FA3 418 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 OR14A2Q96R54 314 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 AIFM2Q9BRQ8 373 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 SARGQ9BW04 601 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 MFRPQ9BY79 579 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 B3GNT4Q9C0J1 378 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 PLEKHA1Q9HB21 404 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 CA10Q9NS85 328 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 MGAT4CQ9UBM8 478 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 MFSD2BA6NFX1 497 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ARPC1BO15143 372 aaKnown RBP14.33□□□□□ -0.12
DDX55-201ENST00000238146 RNGTTO60942 597 aaKnown RBP14.33□□□□□ -0.12
DDX55-201ENST00000238146 ADH1AP07327 375 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 RHOP08100 348 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 RAD52P43351 418 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 FAM199XQ6PEV8 388 aaPredicted RBP14.33□□□□□ -0.12
DDX55-201ENST00000238146 OVCH1Q7RTY7 1134 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 NRROSQ86YC3 692 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ARL14Q8N4G2 192 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ESX1Q8N693 406 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 MOSPD2Q8NHP6 518 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 SLC2A12Q8TD20 617 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 WFIKKN2Q8TEU8 576 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 ARSGQ96EG1 525 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 C10orf90Q96M02 699 aa14.33□□□□□ -0.12
DDX55-201ENST00000238146 CCDC86Q9H6F5 360 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms