RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 FBXO27Q8NI29 283 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SLC26A7Q8TE54 656 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 CA5BP1Q8WTZ4 195 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SLC25A43Q8WUT9 341 aaPredicted RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SMPDL3BQ92485 455 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 LRRC46Q96FV0 321 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 REXO5Q96IC2 774 aaKnown RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 TRIB1Q96RU8 372 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 IKZF5Q9H5V7 419 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 ACER3Q9NUN7 267 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 DNAJB12Q9NXW2 375 aaKnown RBP10.17□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF175Q9Y473 711 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 AKAP9Q99996 3911 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
SF3B6-201ENST00000233468 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 B4DXG7 233 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 EIF1AYO14602 144 aaKnown RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 OIP5O43482 229 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 SYNGR4O95473 234 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 SLC7A1P30825 629 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 SLC1A3P43003 542 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 IDH2P48735 452 aaKnown RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 CLK1P49759 484 aaKnown RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 NUDT2P50583 147 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 DLX5P56178 289 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 NUP107P57740 925 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 SESN3P58005 492 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 NCALDP61601 193 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 MERTKQ12866 999 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 EPS8Q12929 822 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 VEZF1Q14119 521 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 ADRM1Q16186 407 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 VMACQ2NL98 169 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 NDUFAF6Q330K2 333 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 DCST1Q5T197 706 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 GTF2IRD2BQ6EKJ0 949 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 RTL6Q6ICC9 239 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 C3orf33Q6P1S2 294 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 DHRS4L2Q6PKH6 230 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF836Q6ZNA1 936 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 GTF2IRD2Q86UP8 949 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 VRK2Q86Y07 508 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 CNOT9Q92600 299 aaKnown RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 SDCCAG3Q96C92 435 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 KLHL15Q96M94 604 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 TUBA1CQ9BQE3 449 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 SLC39A3Q9BRY0 314 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 PINK1Q9BXM7 581 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 PRRG4Q9BZD6 226 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 TAGLN3Q9UI15 199 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 MCTS1Q9ULC4 181 aaKnown RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 FAM215AQ9Y5M1 114 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 KLF2Q9Y5W3 355 aaPredicted RBP10.16□□□□□ -0.78
SF3B6-201ENST00000233468 CCDC168Q8NDH2 2452 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 C2CD3Q4AC94 2353 aa10.16□□□□□ -0.78
SF3B6-201ENST00000233468 MBD3L4A6NDZ8 208 aaPredicted RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 MBD3L3A6NE82 208 aaPredicted RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 MBD3L5A6NJ08 208 aaPredicted RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 SLC22A20A6NK97 555 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CLDN24A6NM45 220 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CLCA1A8K7I4 914 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 FAM220BPB1ANY3 271 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 FXYD1O00168 92 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 DVL2O14641 736 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 ADAMDEC1O15204 470 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 GMNNO75496 209 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CLDN14O95500 239 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 NTN1O95631 604 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 C8BP07358 591 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 PSMA4P25789 261 aaKnown RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 AQP1P29972 269 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 OPRM1P35372 400 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 EIF1AXP47813 144 aaKnown RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 POLR2HP52434 150 aaKnown RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CLDN15P56746 228 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CARD18P57730 90 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 ADORA2A-AS1P86434 159 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 SELPLGQ14242 412 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 KRT72Q14CN4 511 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CDSNQ15517 529 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 TOMM34Q15785 309 aaPredicted RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 RABL3Q5HYI8 236 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 FAM91A1Q658Y4 838 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 HBMQ6B0K9 141 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 WBP2NLQ6ICG8 309 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 PLEKHM3Q6ZWE6 761 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 HMGN2P46Q86SG4 172 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 PTOV1Q86YD1 416 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 TREML1Q86YW5 311 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 ZZZ3Q8IYH5 903 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 OR2T12Q8NG77 320 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 OR2V1Q8NHB1 315 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 MBD3L2Q8NHZ7 208 aaPredicted RBP10.15□□□□□ -0.78
SF3B6-201ENST00000233468 POC1BQ8TC44 478 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 CHST11Q9NPF2 352 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 KCNJ16Q9NPI9 418 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 SELENONQ9NZV5 590 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 RPS6KB2Q9UBS0 482 aa10.15□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF629Q9UEG4 869 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms