RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TIMM23BQ5SRD1 257 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 ANXA8L1Q5VT79 327 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 SAXO2Q658L1 398 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 ABLIM2Q6H8Q1 611 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 TYW3Q6IPR3 259 aaKnown RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 DNM1P46Q6ZS02 220 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 BHLHA15Q7RTS1 189 aaPredicted RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 PRIMA1Q86XR5 153 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 VPS37AQ8NEZ2 397 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 NEURL3Q96EH8 262 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 TRMT61AQ96FX7 289 aaKnown RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 CCDC106Q9BWC9 280 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 OR51I1Q9H343 314 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 EXOSC3Q9NQT5 275 aaKnown RBP14.05□□□□□ -0.16
ERCC1-201ENST00000013807 PRDM4Q9UKN5 801 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 MXRA5Q9NR99 2828 aa14.05□□□□□ -0.16
ERCC1-201ENST00000013807 IGHV3-15A0A0B4J1V0 119 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 SMAD7O15105 426 aaKnown RBP14.04□□□□□ -0.16
ERCC1-201ENST00000013807 TM9SF1O15321 606 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 SOAT1P35610 550 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 H3F3AP84243 136 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 BSPH1Q075Z2 132 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 FUT5Q11128 374 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 TNK1Q13470 666 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 PGGHGQ32M88 737 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 TNFAIP8L3Q5GJ75 292 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 ATAD3BQ5T9A4 648 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 OGFOD2Q6N063 350 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 C16orf62Q7Z3J2 963 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 GALNT5Q7Z7M9 940 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 CLEC4FQ8N1N0 589 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 TMCO5AQ8N6Q1 288 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 RFWD2Q8NHY2 731 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 SMAP2Q8WU79 429 aaPredicted RBP14.04□□□□□ -0.16
ERCC1-201ENST00000013807 ZG16BQ96DA0 208 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 OR5B2Q96R09 309 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF300Q96RE9 604 aaPredicted RBP14.04□□□□□ -0.16
ERCC1-201ENST00000013807 SORT1Q99523 831 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 DPY30Q9C005 99 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 QRSL1Q9H0R6 528 aaKnown RBP14.04□□□□□ -0.16
ERCC1-201ENST00000013807 PRSS50Q9UI38 385 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 HDGFL3Q9Y3E1 203 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 WDR45Q9Y484 360 aa14.04□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF716A6NP11 495 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 SULT2B1O00204 365 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 PMS2P2O95744 297 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 FESP07332 822 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 UBTFL6P0CB48 400 aaPredicted RBP14.03□□□□□ -0.16
ERCC1-201ENST00000013807 OR12D1P0DN82 309 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 IGHV1-2P23083 117 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 EDNRAP25101 427 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 IDUAP35475 653 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 CCR4P51679 360 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 SLC16A1P53985 500 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 TXNL4AP83876 142 aaKnown RBP14.03□□□□□ -0.16
ERCC1-201ENST00000013807 PLAURQ03405 335 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 KRTAP1-1Q07627 177 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 MERTKQ12866 999 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 CHI3L2Q15782 390 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 PDCD2Q16342 344 aaPredicted RBP14.03□□□□□ -0.16
ERCC1-201ENST00000013807 FRRS1Q6ZNA5 592 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 GRINAQ7Z429 371 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 DTX2Q86UW9 622 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF619Q8N2I2 560 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 ZNF433Q8N7K0 673 aaPredicted RBP14.03□□□□□ -0.16
ERCC1-201ENST00000013807 OR4A15Q8NGL6 344 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 XAGE5Q8WWM1 108 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 PMM1Q92871 262 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 RADILQ96JH8 1075 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 CHRNA9Q9UGM1 479 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 BTNL2Q9UIR0 455 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 TRAPPC4Q9Y296 219 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 SPIN1Q9Y657 262 aaPredicted RBP14.03□□□□□ -0.16
ERCC1-201ENST00000013807 ARFGEF3Q5TH69 2177 aa14.03□□□□□ -0.16
ERCC1-201ENST00000013807 PRAMEF27A3QJZ7 478 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 OR5H1A6NKK0 313 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 SHISA9B4DS77 424 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 FAAHO00519 579 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 GPR171O14626 319 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 BCAS1O75363 584 aaPredicted RBP14.02□□□□□ -0.17
ERCC1-201ENST00000013807 LYZL6O75951 148 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 CD8AP01732 235 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 SLC1A6P48664 564 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 MAP2K6P52564 334 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 CLNS1AP54105 237 aaKnown RBP14.02□□□□□ -0.17
ERCC1-201ENST00000013807 KCNJ10P78508 379 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 PPA1Q15181 289 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 CLEC12BQ2HXU8 276 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 C1QTNF12Q5T7M4 302 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 FBXW9Q5XUX1 488 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 ATG4DQ86TL0 474 aaPredicted RBP14.02□□□□□ -0.17
ERCC1-201ENST00000013807 ADGRG3Q86Y34 549 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 CMIPQ8IY22 773 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 MUCL1Q96DR8 90 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 PKNOX2Q96KN3 472 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 CCDC115Q96NT0 180 aa14.02□□□□□ -0.17
ERCC1-201ENST00000013807 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms