RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Spg11Q3UHA3 2430 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gm14418A2ARR6 358 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gm14322A2AW66 358 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 TriqkB2B9E1 86 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gm21876F6XK35 94 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 B3galt1O54904 326 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Nr4a1P12813 601 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 BgnP28653 369 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr13P34984 310 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Sox18P43680 377 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 MitfQ08874 526 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ly6eQ64253 130 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Nipal3Q8BGN5 410 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cept1Q8BGS7 416 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Rcn3Q8BH97 328 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 2810021J22RikQ8BIB6 539 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 LzicQ8K3C3 190 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Fezf2Q9ESP5 455 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Lancl2Q9JJK2 450 aa19.49■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 A0A1Y7VIU7 259 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Lrrc72A0A1Y7VMI0 288 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr750E9Q0Z1 331 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr66F8VQ01 311 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 FaimlJ3QPY3 178 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Vmn2r117K7N6V1 857 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slc10a1O08705 362 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Hmox2O70252 315 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 TP20293 436 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 ChrneP20782 493 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Serpine1P22777 402 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 EsrrgP62509 458 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 VwceQ3U515 929 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Dcp1bQ3U564 578 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Fbxo34Q80XI1 695 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Lpar4Q8BLG2 370 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 DctdQ8K2D6 178 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cbr3Q8K354 277 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Stk32cQ8QZV4 488 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Vmn1r217Q8R270 298 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Mrgprb3Q91ZC1 312 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Taf11Q99JX1 211 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Mrpl24Q9CQ06 216 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Tmem176aQ9DCS1 244 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 ErmapQ9JLN5 566 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 SigirrQ9JLZ8 409 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 BptfA2A654 3036 aaKnown RBP19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr1123A2AT85 323 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Gm14085A2AWR5 660 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slc22a1O08966 556 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cd79aP11911 220 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 RetP35546 1115 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Sirt6P59941 334 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Hdac2P70288 488 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 InhaQ04997 366 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Prelid2Q0VBB0 177 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 P2rx5Q3UYI1 455 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slc16a11Q5NC32 447 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Zscan26Q5RJ54 466 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Art1Q60935 325 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 CybaQ61462 192 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Klhl6Q6V595 619 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Zc3h12dQ8BIY3 533 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Pdlim5Q8CI51 591 aaKnown RBP19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Scmh1Q8K214 706 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Slc35a3Q8R1T4 326 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Clec2dQ91V08 207 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 D10Jhu81eQ9D172 266 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Nos1apQ9D3A8 503 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Pou5f2Q9DAC9 329 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Smok1Q9QYZ4 484 aa19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 PpieQ9QZH3 301 aaKnown RBP19.48■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Loxhd1C8YR32 2068 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Trbc2A0A075B5J4 173 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Spata6lB2RV46 347 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 S100zB9EJL3 99 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Fkbp8O35465 402 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Vti1bO88384 232 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cyp1a2P00186 513 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 P01851 173 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Mfn2Q80U63 757 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Zik1Q80YP6 463 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Smndc1Q8BGT7 238 aaKnown RBP19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Coro2aQ8C0P5 524 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 BicralQ8CHH5 1074 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Ctxn1Q8K129 82 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Atp6v1b1Q91YH6 513 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Vmp1Q99KU0 406 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 SelenosQ9BCZ4 190 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Dpep3Q9DA79 493 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Exosc1Q9DAA6 195 aaKnown RBP19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Jph1Q9ET80 660 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Cpn1Q9JJN5 457 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Rgs1Q9JL25 209 aa19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Eif3iQ9QZD9 325 aaKnown RBP19.47■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr1034A0A1L1ST14 310 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Stpg3A2RSX4 306 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Olfr31E9Q3K2 317 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 Prdx4O08807 274 aaKnown RBP19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 F10O88947 481 aa19.46■□□□□ 0.71
Ccdc88a-202ENSMUST00000109477 ThP24529 498 aa19.46■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms