RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Pcnx1Q9QYC1 2344 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Clk3O35492 638 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Klk1b1P00755 261 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Csf1P07141 552 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Rrm2P11157 390 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ets2P15037 468 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Nkx2-6P43688 289 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Txnl4aP83877 142 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Map3k8Q07174 467 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Mks1Q5SW45 561 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Prm3Q62100 101 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gpr68Q8BFQ3 365 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Cdcp2Q8BQH6 427 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ctxn1Q8K129 82 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Olfr870Q8VGG4 311 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tmed5Q9CXE7 229 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Srfbp1Q9CZ91 441 aaKnown RBP9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gkn3Q9D0T7 191 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tomm20lQ9D4V6 152 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Med8Q9D7W5 268 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ninj2Q9JL89 143 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Cyp11a1Q9QZ82 526 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Npas3Q9QZQ0 925 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 A0A286YD17 136 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Olfr730E9Q8M3 318 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gm17615E9Q9P2 165 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Irf1P15314 329 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Impdh2P24547 514 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Mmp12P34960 473 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Alg11Q3TZM9 492 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ffar1Q76JU9 300 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tas2r104Q7M723 302 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Rhbdd3Q8BP97 385 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tigd4Q8BUZ3 513 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Nlgn3Q8BYM5 825 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Coro2aQ8C0P5 524 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Wdr37Q8CBE3 496 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 GatcQ8CBY0 155 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Dppa4Q8CCG4 296 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Thap1Q8CHW1 210 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Rfc3Q8R323 356 aaKnown RBP9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Cd209eQ91ZW7 208 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Chrm3Q9ERZ3 589 aa9.11□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gm7682A0A0J9YUM1 481 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Olfr1097A2AVA9 315 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gm3752A6NAT4 150 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Slc22a28B2RT89 552 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Serpinb9cI7HJI5 387 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gm10340K7N708 205 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Vmn2r95L7N274 845 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Rad51dO55230 329 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Hcn3O88705 779 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Zfp36P22893 319 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Hrh3P58406 445 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 AnpepP97449 966 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ddhd2Q80Y98 699 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Krr1Q8BGA5 380 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Flrt3Q8BGT1 649 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Plekhm3Q8BM47 761 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 PgghgQ8BP56 690 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ddit4lQ8VHZ5 193 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Spred1Q924S8 444 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Slc22a30Q96LX3 552 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Mri1Q9CQT1 369 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 2610042L04RikQ9D073 150 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Sec23bQ9D662 767 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Dennd4cA6H8H2 1906 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tns1E9Q0S6 1888 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Olfr1006A2ALD2 312 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Zfp949E9Q732 603 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Psmc3ipO35047 217 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Anxa2P07356 339 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Atp1b1P14094 304 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 CckbrP56481 453 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Polr2iP60898 125 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Dnaja1P63037 397 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Sox14Q04892 240 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Ugt8Q64676 541 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Zc3h12dQ8BIY3 533 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Piwil2Q8CDG1 971 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 SgtbQ8VD33 304 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Acer2Q8VD53 275 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Lnx2Q91XL2 687 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Psmd8Q9CX56 353 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Nmrk2Q9D7C9 195 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Tmem38bQ9DAV9 292 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Kat2aQ9JHD2 830 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Celsr1O35161 3034 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Spin2gA0A0N4SW15 236 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gm9920D3YVZ2 140 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Spin2eJ3QNQ0 234 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 P01638 115 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Krt1P04104 637 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Zfp28P10078 825 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Adrb2P18762 418 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 CntfP51642 198 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Fgf11P70378 225 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Faap20Q3UN58 186 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Olfr1167Q7TR26 316 aa9.1□□□□□ -0.95
Ccdc38-201ENSMUST00000092215 Gin1Q8K259 518 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms