RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Dvl3Q61062 716 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Znf354aQ61751 572 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1344Q7TQV3 321 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Supv3l1Q80YD1 779 aaKnown RBP11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Frs3Q91WJ0 492 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Arrb2Q91YI4 410 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ubqln4Q99NB8 596 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Mdm1Q9D067 708 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dok3Q9QZK7 444 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Srebf1Q9WTN3 1134 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ak4Q9WUR9 223 aaKnown RBP11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm28710A0A1B0GR31 962 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr634-ps1A0A1B0GRN7 318 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1360K9J6X0 313 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Col10a1Q05306 680 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 UbqlnlQ14DL0 610 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Dmrtc1bQ2PMX6 267 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 P4ha2Q60716 537 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 BadQ61337 204 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1359Q7TQU5 313 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Slitrk4Q810B8 837 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Tmem163Q8C996 288 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Alkbh3Q8K1E6 286 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr668Q8VGW3 318 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Marc2Q922Q1 338 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Hyal6Q9D4E9 494 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Sec23bQ9D662 767 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Wdr5bQ9D7H2 328 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Alkbh4Q9D8F1 300 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cmtm2aQ9DAR1 169 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr937Q9EQB4 311 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cdk20Q9JHU3 346 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lgals8Q9JL15 316 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm14295A2BG91 834 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn2r91E9Q2U5 856 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Gm4141K9J7H2 306 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 P01669 111 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Klra4Q60651 263 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Olfr1134Q7TR43 312 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 PimregQ8BFY7 231 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Lypd4Q8BVP6 246 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Vmn1r75Q8R289 305 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Zmynd19Q9CQG3 227 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Exosc5Q9CRA8 235 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Ppil1Q9D0W5 166 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Emc9Q9DB76 206 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Cd302Q9DCG2 228 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 NplQ9DCJ9 320 aa11.09□□□□□ -0.63
Pcif1-201ENSMUST00000041643 Igkv17-127A0A0G2JDN5 117 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn2r28L7N203 852 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tcf3P15806 651 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc10a2P70172 348 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Xlr4cQ3TKR2 215 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc35a1Q61420 336 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Oxa1lQ8BGA9 433 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Dcaf12Q8BGZ3 453 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gpr89aQ8BS95 455 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Q8R3C1 574 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 BanpQ8VBU8 548 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem45bQ8VCZ2 278 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Xlr4bQ9JJQ7 215 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 MeltfQ9R0R1 738 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 RlimQ9WTV7 600 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1034A0A1L1ST14 310 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr209L7N1X3 305 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Grem1O70326 184 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 KitlgP20826 273 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Irf2P23906 349 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 UbdP63072 162 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 SgcdP82347 289 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm12258Q5NC63 627 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 BpiQ67E05 483 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Lpcat4Q6NVG1 524 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 P4ha3Q6W3F0 542 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r231Q8R2A3 311 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Prb1Q91X93 504 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 RabifQ91X96 123 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Scgb3a1Q920D7 104 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Shmt2Q9CZN7 504 aaKnown RBP11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Syt8Q9R0N6 395 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Igkv6-29A0A0G2JEI6 115 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr420E9Q4G0 321 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 AldocP05063 363 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfp26P10076 861 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cd82P40237 266 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Alox12eP55249 662 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gfi1P70338 423 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Amz2Q400C8 359 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 CalcrQ60755 533 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 InavaQ7TN12 663 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Trim23Q8BGX0 574 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1512Q8VF72 313 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 EtfdhQ921G7 616 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Thumpd1Q99J36 350 aaKnown RBP11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc46a3Q9DC26 460 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Yipf5Q9EQQ2 257 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Trpm7Q923J1 1863 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1145A2AVC7 325 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Kbtbd6E9PYD7 486 aa11.08□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Btbd16E9Q173 522 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms