RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ubox5Q925F4 539 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Taldo1Q93092 337 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Orc5Q9WUV0 435 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Kif26bQ7TNC6 2112 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Gpr137cE9Q343 423 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 OtcP11725 354 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Bpifa1P97361 278 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Rnf149Q3U2C5 394 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Prm3Q62100 101 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Smad2Q62432 467 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr684Q7TRN8 312 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Pum2Q80U58 1066 aaKnown RBP15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Gramd1cQ8CI52 457 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Irf2bp1Q8R3Y8 584 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 HpgdQ8VCC1 269 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Pdzk1ip1Q9CQH0 114 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Pla2g2fQ9QZT4 168 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Cdc7Q9Z0H0 564 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Ice1E9Q286 2241 aaKnown RBP15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Fer1l5P0DM40 2038 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm28729A0A1B0GSW2 409 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Ces2gE9PV38 560 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr723E9PZU2 309 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 S100a2J3QMC7 104 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr724K7N5X7 309 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Csnk2a2O54833 350 aaKnown RBP15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Fcn2O70497 314 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Mid1O70583 680 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Prph2P15499 346 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Evx2P49749 475 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Fxyd2Q04646 70 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Zfp791Q497V9 528 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Snap91Q61548 901 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 CishQ62225 257 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Scgb2b2Q6UGQ3 114 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Mvb12aQ78HU3 271 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Marveld1Q7TQJ1 173 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1231Q7TQZ8 313 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 SnupnQ80W37 358 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Trmt12Q8BG71 446 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 OacylQ8BML2 685 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Gpr18Q8K1Z6 331 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 PiguQ8K358 434 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1491Q8VEZ5 319 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Ces2cQ91WG0 561 aa15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Imp3Q921Y2 184 aaKnown RBP15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Dimt1Q9D0D4 313 aaKnown RBP15.27■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc37a4A0A1L1SUI3 450 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm266A6H634 200 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 TmppeD3Z286 447 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Rasd1O35626 280 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Map3k8Q07174 467 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Msto1Q2YDW2 556 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 TfptQ3U1J1 259 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Eri2Q5BKS4 688 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Ffar4Q7TMA4 361 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Pcdh19Q80TF3 1145 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Fam210aQ8BGY7 273 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 RfkQ8CFV9 155 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr821Q8VG45 310 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr768Q8VGC4 312 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Gatad2bQ8VHR5 594 aaKnown RBP15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 4931417E11RikQ9CR05 305 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Ift22Q9DAI2 185 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Lypd2Q9DD23 127 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Dctn6Q9WUB4 190 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Zfp68Q9Z116 606 aa15.27■□□□□ 0.03
Shh-201ENSMUST00000002708 Zyg11aA2BFL2 627 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm6576F6YTZ4 274 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Aldh3b3J3QMK6 479 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Mab21l1O70299 359 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 VipP32648 170 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Fam219bQ14DQ1 197 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 AhrrQ3U1U7 701 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Ssr4Q62186 172 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Methig1Q76I26 264 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Sgpp2Q810K3 354 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Clrn1Q8K445 232 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Abhd17cQ8VCV1 320 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Papd4Q91YI6 484 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 ClcnkaQ9WUB7 687 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Trbv21A0A0A6YX06 97 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm3755K7N743 167 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Sstr2P30875 369 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Ly6dP35459 127 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 PfplQ5RKV8 702 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Vdac3Q60931 283 aaKnown RBP15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Acvr1bQ61271 505 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Fmr1nbQ80ZA7 238 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Leng9Q8BTN6 485 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Gm11541Q8C4D8 108 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Mchr1Q8JZL2 353 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Galnt18Q8K1B9 622 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr109Q8VG96 314 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr272Q8VGA0 319 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Olfr790Q8VGJ3 322 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Gorasp2Q99JX3 451 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Lpcat2bQ9D5U0 516 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Prss52Q9D9M0 321 aa15.26■□□□□ 0.03
Shh-201ENSMUST00000002708 Sgk3Q9ERE3 496 aa15.26■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms