RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CDC20Q12834 499 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 NCF4Q15080 339 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 OCLNQ16625 522 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 TIGD6Q17RP2 521 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 ZSWIM7Q19AV6 140 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 NDUFAF6Q330K2 333 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 TBC1D25Q3MII6 688 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 C3orf38Q5JPI3 329 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM164Q5U3C3 297 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 CDCP2Q5VXM1 449 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 C12orf73Q69YU5 71 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 PGBD2Q6P3X8 592 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 KLHL17Q6TDP4 642 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM205Q6UW68 189 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 FAM198BQ6UWH4 519 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 C6orf15Q6UXA7 325 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-219ENST00000641513 Q6ZPB1 254 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF550Q7Z398 422 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 MEX3DQ86XN8 651 aaKnown RBP8.14□□□□□ -1.11
PHGDH-219ENST00000641513 NKAIN4Q8IVV8 208 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 OR4C3Q8NH37 302 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 PIGXQ8TBF5 258 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 GNPDA2Q8TDQ7 276 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 GRHL3Q8TE85 626 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 DIO2Q92813 273 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 GGHQ92820 318 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 ZHX1-C8orf76Q96EF9 292 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 LRFN5Q96NI6 719 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 ZPBPQ9BS86 351 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 POLR2J3Q9H1A7 115 aaKnown RBP8.14□□□□□ -1.11
PHGDH-219ENST00000641513 ANKRD19PQ9H560 264 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 EVA1AQ9H8M9 152 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 KRCC1Q9NPI7 259 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-219ENST00000641513 UBQLN4Q9NRR5 601 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 MAN2C1Q9NTJ4 1040 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 CLN6Q9NWW5 311 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 TESQ9UGI8 421 aaKnown RBP8.14□□□□□ -1.11
PHGDH-219ENST00000641513 PADI1Q9ULC6 663 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 SLC35A3Q9Y2D2 325 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 PCDHGA1Q9Y5H4 931 aa8.14□□□□□ -1.11
PHGDH-219ENST00000641513 A0A087WUU8 490 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 FUOMA2VDF0 154 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 METTL15A6NJ78 407 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 NPIPB9F8W1W9 429 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 WWP2O00308 870 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 AIREO43918 545 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 GMFGO60234 142 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 PIP5K1CO60331 668 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ICOSLGO75144 302 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 SOX14O95416 240 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 NTN1O95631 604 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CYC1P08574 325 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CD63P08962 238 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ADORA3P0DMS8 318 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 GSTM3P21266 225 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 HTR2AP28223 471 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 IDH2P48735 452 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CLK1P49759 484 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 PPP5CP53041 499 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 SLC26A5P58743 744 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 COPZ1P61923 177 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF45Q02386 682 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 KRR1Q13601 381 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 PTGES3Q15185 160 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 SMN1Q16637 294 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF181Q2M3W8 571 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 BTBD16Q32M84 506 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ANKDD1AQ495B1 522 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 PLAG1Q6DJT9 500 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 C16orf47Q6ZP98 133 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CCDC103Q8IW40 242 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 CMIPQ8IY22 773 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF440Q8IYI8 595 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 NLGN4XQ8N0W4 816 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 STX19Q8N4C7 294 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 NFAM1Q8NET5 270 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 TOR1AIP2Q8NFQ8 470 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 OR8J1Q8NGP2 316 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 OR5M3Q8NGP4 307 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 WDR36Q8NI36 951 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 NDNFQ8TB73 568 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM255BQ8WV15 326 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ACOT11Q8WXI4 607 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 LIN37Q96GY3 246 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 FAM46AQ96IP4 442 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 DDA1Q9BW61 102 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 DEFB126Q9BYW3 111 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 TBL1XR1Q9BZK7 514 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 TRIM2Q9C040 744 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 POLR2J2Q9GZM3 115 aaKnown RBP8.13□□□□□ -1.11
PHGDH-219ENST00000641513 IRF2BPLQ9H1B7 796 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 DCSTAMPQ9H295 470 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 DSN1Q9H410 356 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 SP140LQ9H930 580 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 SLC25A19Q9HC21 320 aa8.13□□□□□ -1.11
PHGDH-219ENST00000641513 ZBTB20Q9HC78 741 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms