RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 FUCA2Q9BTY2 467 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 KRTAP9-9Q9BYP9 154 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 HDHD2Q9H0R4 259 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 CXCL16Q9H2A7 254 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 DAPK2Q9UIK4 370 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 UTS2RQ9UKP6 389 aa6.57□□□□□ -1.36
NECAP1-220ENST00000639841 MYO16Q9Y6X6 1858 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 THADAQ6YHU6 1953 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 TEX51A0A1B0GUA7 166 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 OVOL3O00110 214 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 RNF8O76064 485 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 MYO1DO94832 1006 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 NDUFA10O95299 355 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 ANP32DO95626 131 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 ATP1B2P14415 290 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-220ENST00000639841 HMGA1P17096 107 aaKnown RBP6.56□□□□□ -1.36
NECAP1-220ENST00000639841 NDUFB7P17568 137 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 PSMA2P25787 234 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 PLP1P60201 277 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 SLC7A9P82251 487 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 KRT81Q14533 505 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 TAF13Q15543 124 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 SFT2D3Q587I9 215 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 KIAA0895LQ68EN5 471 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 KCTD18Q6PI47 426 aaPredicted RBP6.56□□□□□ -1.36
NECAP1-220ENST00000639841 C5orf24Q7Z6I8 188 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 PARP8Q8N3A8 854 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 OR7G1Q8NGA0 311 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 FOXN4Q96NZ1 517 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 PARD6BQ9BYG5 372 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 MS4A12Q9NXJ0 267 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 TECRQ9NZ01 308 aaKnown RBP6.56□□□□□ -1.36
NECAP1-220ENST00000639841 PILRBQ9UKJ0 227 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 ABCG2Q9UNQ0 655 aa6.56□□□□□ -1.36
NECAP1-220ENST00000639841 ANK1P16157 1881 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 TMEM120BA0PK00 339 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 GAGE12BA1L429 117 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 GAGE12HA6NDE8 117 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 MROH6A6NGR9 719 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SERPINE3A8MV23 424 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 E9PQ18 207 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 RNASET2O00584 256 aaKnown RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 GPR137BO60478 399 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SCGNO76038 276 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SERPINE2P07093 398 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR4Q2P0C623 313 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ACADSBP45954 432 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ATP1B3P54709 279 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 CDK16Q00536 496 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 PIGHQ14442 188 aaPredicted RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF699Q32M78 642 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 CYP4V2Q6ZWL3 525 aaPredicted RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 LGI2Q8N0V4 545 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 MFSD9Q8NBP5 474 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR10H4Q8NGA5 316 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 LRRN3Q9H3W5 708 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SEC61A2Q9H9S3 476 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 PSMC3IPQ9P2W1 217 aaPredicted RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 GNG12Q9UBI6 72 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR1A2Q9Y585 309 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 STYXL1Q9Y6J8 313 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF840PA6NDX5 716 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 FBLL1A6NHQ2 334 aaKnown RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 LATO43561 262 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SCN2BO60939 215 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR5F1O95221 314 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ELFN1P0C7U0 828 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 MSH3P20585 1137 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 CCNOP22674 350 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 MNDAP41218 407 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 GTF2BQ00403 316 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 GANABQ14697 944 aaKnown RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 CCDC6Q16204 474 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ACSF3Q4G176 576 aaPredicted RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SMUG1Q53HV7 270 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 AARS2Q5JTZ9 985 aaKnown RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ASPHD1Q5U4P2 390 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SLX4IPQ5VYV7 408 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 RTL6Q6ICC9 239 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR4A47Q6IF82 309 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 TCEAL6Q6IPX3 200 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 TPGS1Q6ZTW0 290 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 SHFQ7M4L6 423 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 H2BFWTQ7Z2G1 175 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 C4orf32Q8N8J7 132 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR5T3Q8NGG3 340 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OR13C3Q8NGS6 347 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 TCEAL3Q969E4 200 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 RAB11FIP5Q9BXF6 653 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 OPN3Q9H1Y3 402 aaPredicted RBP6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF665Q9H7R5 613 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 LPAR2Q9HBW0 351 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 CLEC5AQ9NY25 188 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 POLDIP2Q9Y2S7 368 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF175Q9Y473 711 aa6.55□□□□□ -1.36
NECAP1-220ENST00000639841 ADAMTS20P59510 1910 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 TRBV11-1A0A0K0K1C0 115 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 WNT9BO14905 357 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 ARPC2O15144 300 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms