RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PCDH15Q96QU1 1955 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 TRDV1A0A1B0GX56 115 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 SMIM30A4D0T7 59 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 HYAL3O43820 417 aaPredicted RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 PRKNO60260 465 aaPredicted RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 PPP1R3DO95685 299 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 CSTAP01040 98 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 CD97P48960 835 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 SLC16A1P53985 500 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 RPS7P62081 194 aaKnown RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 SERTAD2Q14140 314 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 ZNF362Q5T0B9 420 aaPredicted RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 TMPRSS11AQ6ZMR5 421 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 TMEM99Q8N816 258 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 C1orf216Q8TAB5 229 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 AHCYL2Q96HN2 611 aaKnown RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 DCLRE1CQ96SD1 692 aaKnown RBP19.8■□□□□ 0.76
CLN6-224ENST00000638076 KATNB1Q9BVA0 655 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 CHRNA10Q9GZZ6 450 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 OR51V1Q9H2C8 321 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 C14orf119Q9NWQ9 140 aa19.8■□□□□ 0.76
CLN6-224ENST00000638076 SERINC4A6NH21 518 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 RIIAD1A6NNX1 92 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 C17orf105B2RV13 164 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 CSTF1Q05048 431 aaKnown RBP19.79■□□□□ 0.76
CLN6-224ENST00000638076 FHL1Q13642 323 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 ZSWIM7Q19AV6 140 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 RTL4Q6ZR62 310 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 TTLL10Q6ZVT0 673 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 CMIPQ8IY22 773 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 WDFY2Q96P53 400 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 CCDC32Q9BV29 185 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 HDHD5Q9BXW7 423 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 RAB33BQ9H082 229 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 MCCC2Q9HCC0 563 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 PRODH2Q9UF12 536 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 SLC35A3Q9Y2D2 325 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 V9GYH0 126 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 REM1O75628 298 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 DLGAP3O95886 979 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 ALAS2P22557 587 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 NOS3P29474 1203 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 COPZ1P61923 177 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 ARIH2OSQ8N7S6 290 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 CYB561A3Q8NBI2 242 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 ITFG2Q969R8 447 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 LMF1Q96S06 567 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 TEAD3Q99594 435 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 ALG8Q9BVK2 526 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 CUTCQ9NTM9 273 aa19.79■□□□□ 0.76
CLN6-224ENST00000638076 ABCA7Q8IZY2 2146 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 SLC22A31A6NKX4 558 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 PIAS2O75928 621 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 PTTG1O95997 202 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 OR1D4P47884 311 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 EPHA4P54764 986 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 OR1D5P58170 312 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 VASNQ6EMK4 673 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 ATP6V1C2Q8NEY4 427 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 EFHD2Q96C19 240 aaPredicted RBP19.78■□□□□ 0.76
CLN6-224ENST00000638076 CLIP3Q96DZ5 547 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 ART5Q96L15 291 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 FAM210AQ96ND0 272 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 PELOQ9BRX2 385 aaKnown RBP19.78■□□□□ 0.76
CLN6-224ENST00000638076 ABCB9Q9NP78 766 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 LANCL2Q9NS86 450 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 TRAPPC4Q9Y296 219 aa19.78■□□□□ 0.76
CLN6-224ENST00000638076 CCDC182A6NF36 153 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 OR2B3O76000 313 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 HLA-DPB1P04440 258 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 CLUP10909 449 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 ZNF3P17036 446 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 GALNSP34059 522 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 STARD6P59095 220 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 CRMP1Q14194 572 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLN6-224ENST00000638076 ZMAT1Q5H9K5 638 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 ARMC4Q5T2S8 1044 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 SDR16C5Q8N3Y7 309 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 SENP5Q96HI0 755 aaPredicted RBP19.77■□□□□ 0.76
CLN6-224ENST00000638076 PNO1Q9NRX1 252 aaKnown RBP19.77■□□□□ 0.76
CLN6-224ENST00000638076 BAIAP2Q9UQB8 552 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 TNRC18O15417 2968 aaPredicted RBP19.77■□□□□ 0.76
CLN6-224ENST00000638076 MYO15AQ9UKN7 3530 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 DAPL1A0PJW8 107 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 SLC35F4A4IF30 521 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 EFCAB7A8K855 629 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 TMEM150CB9EJG8 249 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 GABRPO00591 440 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 PEPDP12955 493 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 IL9P15248 144 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 HK1P19367 917 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 SLC6A6P31641 620 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 INSL4Q14641 139 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 OR8H2Q8N162 312 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 ZNF321PQ8N8H1 164 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 ZSCAN1Q8NBB4 408 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 OR10H4Q8NGA5 316 aa19.77■□□□□ 0.76
CLN6-224ENST00000638076 PTPMT1Q8WUK0 201 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms