RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 WDR70Q9NW82 654 aa10.74□□□□□ -0.69
CLN6-223ENST00000637823 HPF1Q9NWY4 346 aa10.74□□□□□ -0.69
CLN6-223ENST00000637823 PPP4R1LQ9P1A2 415 aa10.74□□□□□ -0.69
CLN6-223ENST00000637823 WIF1Q9Y5W5 379 aa10.74□□□□□ -0.69
CLN6-223ENST00000637823 A0A087WUJ7 227 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 LOC100130705A0A1B0GUX0 176 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 HTR3EA5X5Y0 456 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ANKRD33BA6NCL7 494 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 C2orf72A6NCS6 295 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ANKUB1A6NFN9 424 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ZNF891A8MT65 544 aaPredicted RBP10.73□□□□□ -0.69
CLN6-223ENST00000637823 NKX2-8O15522 239 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 NUDT14O95848 222 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 POU2F1P14859 743 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 MYF6P23409 242 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ITGA3P26006 1051 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 OMPP47874 163 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 GSSP48637 474 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 CTBP2P56545 445 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ALDH6A1Q02252 535 aaKnown RBP10.73□□□□□ -0.69
CLN6-223ENST00000637823 PRKCDQ05655 676 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 TSPAN31Q12999 210 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 IL18R1Q13478 541 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 COL28A1Q2UY09 1125 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ABHD17BQ5VST6 288 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 B3GNTL1Q67FW5 361 aaPredicted RBP10.73□□□□□ -0.69
CLN6-223ENST00000637823 BICRALQ6AI39 1079 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 KLHL17Q6TDP4 642 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 WDR88Q6ZMY6 472 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 USP51Q70EK9 711 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 CHERPQ8IWX8 916 aaKnown RBP10.73□□□□□ -0.69
CLN6-223ENST00000637823 NRMQ8IXM6 262 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 C3orf49Q96BT1 292 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 NTNG2Q96CW9 530 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ZNF570Q96NI8 536 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 NR1H4Q96RI1 486 aaPredicted RBP10.73□□□□□ -0.69
CLN6-223ENST00000637823 ZNF426Q9BUY5 554 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 SCNM1Q9BWG6 230 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 GRIP2Q9C0E4 1043 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 RIBC2Q9H4K1 309 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 GALNT9Q9HCQ5 603 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 ABI3Q9P2A4 366 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 REV1Q9UBZ9 1251 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 WASF3Q9UPY6 502 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 TMEM5Q9Y2B1 443 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 MED31Q9Y3C7 131 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 PCDHGB6Q9Y5F9 930 aa10.73□□□□□ -0.69
CLN6-223ENST00000637823 FREM3P0C091 2139 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ELOA3DA6NLF2 546 aaPredicted RBP10.72□□□□□ -0.69
CLN6-223ENST00000637823 E9PQ18 207 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 CDC40O60508 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLN6-223ENST00000637823 SNX4O95219 450 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 OSMP13725 252 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 POLR2IP36954 125 aaKnown RBP10.72□□□□□ -0.69
CLN6-223ENST00000637823 HTR3AP46098 478 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 CYB561P49447 251 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 CRISP1P54107 249 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 PDK3Q15120 406 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ELOA3BQ3SY89 546 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ATP1A1-AS1Q5TC04 95 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ZNF468Q5VIY5 522 aaPredicted RBP10.72□□□□□ -0.69
CLN6-223ENST00000637823 ATG4DQ86TL0 474 aaPredicted RBP10.72□□□□□ -0.69
CLN6-223ENST00000637823 CYP4Z2PQ8N1L4 340 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 BEST3Q8N1M1 668 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 GALNT16Q8N428 558 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ELOA3Q8NG57 546 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 TMEM234Q8WY98 164 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ST8SIA1Q92185 356 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 CNBD2Q96M20 576 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 TMEM43Q9BTV4 400 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 DPH1Q9BZG8 443 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 SLC19A3Q9BZV2 496 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 TAS2R10Q9NYW0 307 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 MED11Q9P086 117 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 POLHQ9Y253 713 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 MSRB2Q9Y3D2 182 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 CNTRLQ7Z7A1 2325 aa10.72□□□□□ -0.69
CLN6-223ENST00000637823 ARGFXA6NJG6 315 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 C17orf51A8MQB3 221 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 BCKDKO14874 412 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 KLF4O43474 513 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 NTN1O95631 604 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 IGF2P01344 180 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 P04436 131 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 GNAO1P09471 354 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 CCL3P10147 92 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 PRKAR1AP10644 381 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 CXCR1P25024 350 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 FPR3P25089 353 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 TACR3P29371 465 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 CASRP41180 1078 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 ST13P50502 369 aaKnown RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 POLR2HP52434 150 aaKnown RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 DLX5P56178 289 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 LSM11P83369 360 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLN6-223ENST00000637823 SRSF6Q13247 344 aaKnown RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 KEAP1Q14145 624 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 QPRTQ15274 297 aa10.71□□□□□ -0.69
CLN6-223ENST00000637823 TOMM34Q15785 309 aaPredicted RBP10.71□□□□□ -0.69
CLN6-223ENST00000637823 OR5M10Q6IEU7 315 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms