RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 PRKCAP17252 672 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CTRB1P17538 263 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 RAB3BP20337 219 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 NPR2P20594 1047 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 M6PRP20645 277 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TEAD1P28347 426 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PSMD4P55036 377 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SRP54P61011 504 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CSNK1G2P78368 415 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 METRNLQ641Q3 311 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CTRB2Q6GPI1 263 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SIGIRRQ6IA17 410 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SLC30A6Q6NXT4 461 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SLC48A1Q6P1K1 146 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CFAP161Q6P656 301 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ASB18Q6ZVZ8 466 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 VASH1Q7L8A9 365 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CEACAM19Q7Z692 300 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 RBM45Q8IUH3 476 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CPOQ8IVL8 374 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 EID2Q8N6I1 236 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 COX18Q8N8Q8 333 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZFP41Q8N8Y5 198 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ACOT4Q8N9L9 421 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MFSD9Q8NBP5 474 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MORN4Q8NDC4 146 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR4K14Q8NGD5 310 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR5W2Q8NH69 310 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 RPLP0P6Q8NHW5 317 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SORCS1Q8WY21 1168 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CMTM3Q96MX0 182 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 FYTTD1Q96QD9 318 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF559Q9BR84 538 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR51J1Q9H342 316 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZDHHC4Q9NPG8 344 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TEX10Q9NXF1 929 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CNIH4Q9P003 139 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 UBQLN2Q9UHD9 624 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 NUP50Q9UKX7 468 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SH2B3Q9UQQ2 575 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF443Q9Y2A4 671 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SNRNP200O75643 2136 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TEX13CA0A0J9YWL9 993 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TUBAL3A6NHL2 446 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TMPRSS11DO60235 418 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 FMO6PO60774 539 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 GATBO75879 557 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 IGHA1P01876 353 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CTSLP07711 333 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CHRM4P08173 479 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LIMS3P0CW19 117 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LIMS4P0CW20 117 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ATP5A1P25705 553 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ITGA3P26006 1051 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SSTR4P31391 388 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 GPR4P46093 362 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OR3A3P47888 321 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 RFX3P48380 749 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ARHGDIBP52566 201 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 NRG3P56975 720 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CDK3Q00526 305 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MAPK14Q16539 360 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 NDUFAF6Q330K2 333 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LILRA6Q6PI73 481 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ABHD13Q7L211 337 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OAFQ86UD1 273 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 AMIGO1Q86WK6 493 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 OOSP2Q86WS3 158 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ADGRF3Q8IZF5 1079 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CADM2Q8N3J6 435 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 FAM98AQ8NCA5 519 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TRMT10AQ8TBZ6 339 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ZDHHC16Q969W1 377 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ARRDC3Q96B67 414 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SAMD8Q96LT4 415 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CACNG6Q9BXT2 260 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 STRADBQ9C0K7 418 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SPNS1Q9H2V7 528 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PRORYQ9H606 182 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PRDM9Q9NQV7 894 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 POLE3Q9NRF9 147 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 CYSLTR2Q9NS75 346 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 C5AR2Q9P296 337 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PRKAB1Q9Y478 270 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MAB21L2Q9Y586 359 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 A0A0G2JN53 185 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 SMIM30A4D0T7 59 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LRIT2A6NDA9 550 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ANTXRLA6NF34 631 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 GPRIN2O60269 458 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 KHDRBS3O75525 346 aaKnown RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 PAPLNO95428 1278 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 AIFM1O95831 613 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 ASGR2P07307 311 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 MAPK3P27361 379 aaPredicted RBP3.7□□□□□ -1.82
SCN1A-214ENST00000637038 LCN1P31025 176 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 TRIM23P36406 574 aa3.7□□□□□ -1.82
SCN1A-214ENST00000637038 AP2S1P53680 142 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms