RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 J3KTA2 159 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 DDAH2O95865 285 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 MPC1LP0DKB6 136 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 GAAP10253 952 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 RPL23AP62750 156 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 C4orf36Q96KX1 117 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 SIX4Q9UIU6 781 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 OSGIN2Q9Y236 505 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 TOX4O94842 621 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 KCNE1P15382 129 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 CNR2P34972 360 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 FBXO43Q4G163 708 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 CPEB2Q7Z5Q1 589 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 GTPBP8Q8N3Z3 284 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ACVR1CQ8NER5 493 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ZFP90Q8TF47 636 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 PTTG3PQ9NZH4 202 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 TEX51A0A1B0GUA7 166 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 SCGB1D1O95968 90 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 FCER1GP30273 86 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 RNLSQ5VYX0 342 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 HRH4Q9H3N8 390 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 A0A096LPI6 279 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC22A31A6NKX4 558 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 H3BMQ9 156 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC35E2BP0CK96 405 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 EIF2DP41214 584 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 GTDC1Q4AE62 458 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 ANKRD16Q6P6B7 361 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 MMP21Q8N119 569 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 ZFP82Q8N141 532 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 C3orf58Q8NDZ4 430 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 HPSE2Q8WWQ2 592 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 QRSL1Q9H0R6 528 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 POM121CA8CG34 1229 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 AQP9O43315 295 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 HTR2AP28223 471 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 MZT1Q08AG7 82 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 NADSYN1Q6IA69 706 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 SBSNQ6UWP8 590 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 CPOQ8IVL8 374 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 AQP12AQ8IXF9 295 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 TFAP2CQ92754 450 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC43A1O75387 559 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 RFPL1O75677 317 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 PKLRP30613 574 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 POU4F2Q12837 409 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 BORAQ6PGQ7 559 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 BRICD5Q6PL45 260 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 ZFAND4Q86XD8 727 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 SFXN5Q8TD22 340 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 ZBED3Q96IU2 234 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF778Q96MU6 729 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 APMAPQ9HDC9 416 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 STEAP1Q9UHE8 339 aa16.71■□□□□ 0.27
CACNA1A-227ENST00000636549 GABRR3A8MPY1 467 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 H0YAE9 185 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 HADHBP55084 474 aaKnown RBP16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 NCS1P62166 190 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 MGAT3Q09327 533 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC10A2Q12908 348 aaPredicted RBP16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 HBMQ6B0K9 141 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF440Q8IYI8 595 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 ZNF75AQ96N20 296 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 MOV10Q9HCE1 1003 aaKnown RBP16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 FZR1Q9UM11 496 aa16.71■□□□□ 0.26
CACNA1A-227ENST00000636549 MEX3AA1L020 520 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 GABARAPH6UMI1 98 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 FBXO24O75426 580 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 GABARAPO95166 117 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 C8BP07358 591 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 UNC50Q53HI1 259 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 MTHFD2LQ9H903 347 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 NPTNQ9Y639 398 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 D6RAR5 112 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 ZFAND5O76080 213 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 SLC10A3P09131 477 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 HOXA9P31269 272 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 TANGO2Q6ICL3 276 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 NIPA2Q8N8Q9 360 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 NUPL2O15504 423 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 SNRNP70P08621 437 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 HRASLS5Q96KN8 279 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 SARGQ9BW04 601 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 GALNT9Q9HCQ5 603 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 NLKQ9UBE8 527 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 TXNDC12O95881 172 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 TP53P04637 393 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 TNFRSF4P43489 277 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 IFI44Q8TCB0 444 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 TXN2Q99757 166 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 LGALS13Q9UHV8 139 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 CBLCQ9ULV8 474 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 PIRO00625 290 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 DENRO43583 198 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 CD63P08962 238 aa16.7■□□□□ 0.26
CACNA1A-227ENST00000636549 CTSAP10619 480 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms