RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	POU3F4	P49335	361 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ZNF84	P51523	738 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	CYHR1	Q6ZMK1	362 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ANKRD13B	Q86YJ7	626 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	FOXRED2	Q8IWF2	684 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ABHD11	Q8NFV4	315 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	OR8S1	Q8NH09	359 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	SDK2	Q58EX2	2172 aa		13.33	□□□□□ -0.27
NEDD4L-238	ENST00000635997	LRIT2	A6NDA9	550 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	HSPA12A	O43301	675 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TMPRSS11D	O60235	418 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MAS1	P04201	325 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	DPT	Q07507	201 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GXYLT1	Q4G148	440 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	FRMPD2B	Q6IN97	320 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	QSOX2	Q6ZRP7	698 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CBLL1	Q75N03	491 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR2T4	Q8NH00	348 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PGAM5	Q96HS1	289 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CCDC115	Q96NT0	180 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	HOXD1	Q9GZZ0	328 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PLEKHA6	Q9Y2H5	1048 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR51B4	Q9Y5P0	310 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TRGV8	A0A0C4DH27	118 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ARAF	P10398	606 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ENDOU	P21128	410 aa	Known RBP	13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PKLR	P30613	574 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	VASP	P50552	380 aa	Predicted RBP	13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	HLCS	P50747	726 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	REEP5	Q00765	189 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GGTA1P	Q4G0N0	100 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TP53I3	Q53FA7	332 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	NKAPL	Q5M9Q1	402 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ARHGAP11A	Q6P4F7	1023 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF440	Q8IYI8	595 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR8J2	Q8NGG1	315 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	EID2B	Q96D98	161 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	AMDHD1	Q96NU7	426 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	IP6K3	Q96PC2	410 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SEMA6C	Q9H3T2	930 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SEC14L4	Q9UDX3	406 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	KDM4B	O94953	1096 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SOX3	P41225	446 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	NXPH1	P58417	271 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CD83	Q01151	205 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PAMR1	Q6UXH9	720 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CCDC28A	Q8IWP9	274 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TOMM5	Q8N4H5	51 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	BOLL	Q8N9W6	283 aa	Known RBP	13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZFPM2	Q8WW38	1151 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	METTL2A	Q96IZ6	378 aa	Known RBP	13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	UBQLN4	Q9NRR5	601 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	INIP	Q9NRY2	104 aa		13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997	MBD1	Q9UIS9	605 aa	Predicted RBP	13.33	□□□□□ -0.28
NEDD4L-238	ENST00000635997		F5H5K5	113 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ADAM23	O75077	832 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF806	P0C7X5	589 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	NME1	P15531	152 aa	Known RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SPINK2	P20155	84 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GSTM2	P28161	218 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	AP2S1	P53680	142 aa	Predicted RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CDK5R2	Q13319	367 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	C4orf46	Q504U0	113 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PINK1	Q9BXM7	581 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	DOCK5	Q9H7D0	1870 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	KIAA0513	O60268	411 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ETHE1	O95571	254 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	EEF1A1	P68104	462 aa	Known RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	HSD17B12	Q53GQ0	312 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	LILRA2	Q8N149	483 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZFP90	Q8TF47	636 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ISL2	Q96A47	359 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	C8orf44	Q96CB5	159 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CCDC74B	Q96LY2	380 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GABRG3	Q99928	467 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	FUNDC2	Q9BWH2	189 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR10A5	Q9H207	317 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	C14orf119	Q9NWQ9	140 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	TBC1D24	Q9ULP9	559 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PPT2	Q9UMR5	302 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	C7orf72	A4D263	438 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	METTL21EP	A6NDL7	271 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	AGFG2	O95081	481 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	KCNK5	O95279	499 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CRYZL1	O95825	349 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	HPR	P00739	348 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GDF1	P27539	372 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	AP3S2	P59780	193 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR1Q1	Q15612	314 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	GOLM1	Q8NBJ4	401 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	ZNF486	Q96H40	463 aa	Predicted RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	SAP130	Q9H0E3	1048 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	OR52D1	Q9H346	318 aa		13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.32	□□□□□ -0.28
NEDD4L-238	ENST00000635997	CACNA1A	O00555	2505 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms