RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 C17orf51A8MQB3 221 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SLC16A6O15403 523 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 GMFGO60234 142 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 UBL4AP11441 157 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF12P17014 697 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CD247P20963 164 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 RYKP34925 604 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 PTGDSP41222 190 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 KCNJ5P48544 419 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 DNASE1L1P49184 302 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CDH15P55291 814 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SELENOWP63302 87 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 EEF1A1P68104 462 aaKnown RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SNTA1Q13424 505 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 ELOAQ14241 798 aaKnown RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 DUSP7Q16829 419 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 NDUFAF6Q330K2 333 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 EIPR1Q53HC9 387 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 OR5M10Q6IEU7 315 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 IGFL3Q6UXB1 125 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 Q6ZNX1 250 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 ASB18Q6ZVZ8 466 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 GPR32P1Q8NGA4 272 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 C9orf43Q8TAL5 461 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 DUSP19Q8WTR2 217 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 RNF138Q8WVD3 245 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 PROX1Q92786 737 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SH3YL1Q96HL8 342 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 RNF145Q96MT1 663 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF71Q9NQZ8 489 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SDHAF3Q9NRP4 125 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 GALNT8Q9NY28 637 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 PPP4R1LQ9P1A2 415 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 BAG5Q9UL15 447 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CARD8Q9Y2G2 431 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 HCRTR2O43614 444 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 NME2P1O60361 137 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 NOL3O60936 208 aaKnown RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 BCAS1O75363 584 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 PRKD3O94806 890 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SNAP29O95721 258 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CCDC159P0C7I6 412 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 ENDOUP21128 410 aaKnown RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CNR1P21554 472 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 NME2P22392 152 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CRHBPP24387 322 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 MASP1P48740 699 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 GAS1P54826 345 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 PMS2P3Q13401 168 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 MOGQ16653 247 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 TMEM81Q6P7N7 255 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 ENPP6Q6UWR7 440 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 KCTD8Q6ZWB6 473 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 GALNTL5Q7Z4T8 443 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 VTCN1Q7Z7D3 282 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 MISPQ8IVT2 679 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 C8orf59Q8N0T1 100 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 TMCO5AQ8N6Q1 288 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CNOT9Q92600 299 aaKnown RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 HSH2DQ96JZ2 352 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 PROK2Q9HC23 129 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 KLF13Q9Y2Y9 288 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-208ENST00000634934 SH3GLB1Q9Y371 365 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CHST2Q9Y4C5 530 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 EXPH5Q8NEV8 1989 aa13.18□□□□□ -0.3
LINC00339-208ENST00000634934 CDHR4A6H8M9 788 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 GNB5O14775 395 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 ATXN7O15265 892 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF264O43296 627 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 OIP5O43482 229 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 FRS3O43559 492 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 SNX4O95219 450 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 PRB1P04280 392 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 TNFRSF1BP20333 461 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 ADH7P40394 386 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 CCR4P51679 360 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 CXCR4P61073 352 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 ZNF117Q03924 483 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 C17orf67Q0P5P2 114 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 INPP5JQ15735 1006 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-208ENST00000634934 ZSWIM7Q19AV6 140 aa13.17□□□□□ -0.3
LINC00339-208ENST00000634934 GTF2IRD2BQ6EKJ0 949 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms