RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TMEM52BQ4KMG9 183 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 FGD3Q5JSP0 725 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM72AQ5TYM5 149 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 PRAMEF7Q5VXH5 474 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 OR4C11Q6IEV9 310 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM72DQ6L9T8 149 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC27A4Q6P1M0 643 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ZCCHC12Q6PEW1 402 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC25A47Q6Q0C1 308 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM207Q6UWW9 146 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 GDPD4Q6W3E5 623 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 RBMS3Q6XE24 437 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 LEKR1Q6ZMV7 388 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 WDR88Q6ZMY6 472 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 Q6ZSR6 202 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 BTN2A1Q7KYR7 527 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 EFL1Q7Z2Z2 1120 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 C5orf24Q7Z6I8 188 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 PTAR1Q7Z6K3 402 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM72BQ86X60 149 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM71AQ8IYT1 594 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 DEFB106AQ8N104 65 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 CIARTQ8N365 385 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ARL6IP6Q8N6S5 226 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 STPG4Q8N801 248 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP6V0D2Q8N8Y2 350 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC37A3Q8NCC5 494 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 TRPV3Q8NET8 790 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 OR4C3Q8NH37 302 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 OR4A16Q8NH70 328 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 WDR36Q8NI36 951 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 MAPK15Q8TD08 544 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 APOBEC4Q8WW27 367 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 DYRK2Q92630 601 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 RAB7BQ96AH8 199 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ESAMQ96AP7 390 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ECHDC3Q96DC8 303 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 GIMAP5Q96F15 307 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 C14orf79Q96F83 325 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 DHTKD1Q96HY7 919 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 RPRD1AQ96P16 312 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 CCNL2Q96S94 520 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 SPAG8Q99932 426 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 CCM2Q9BSQ5 444 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 CALN1Q9BXU9 219 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC17A9Q9BYT1 436 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 TRIM4Q9C037 500 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ATG10Q9H0Y0 220 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ADNPQ9H2P0 1102 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 MARCH7Q9H992 704 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 VIPAS39Q9H9C1 493 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 LIN28AQ9H9Z2 209 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 FGF22Q9HCT0 170 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 POLE3Q9NRF9 147 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ACOXLQ9NUZ1 547 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 ANKMY1Q9P2S6 941 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 LHX3Q9UBR4 397 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 EPHA6Q9UF33 1036 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 APOBEC3BQ9UH17 382 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 MRPS2Q9Y399 296 aaKnown RBP2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 SNX10Q9Y5X0 201 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 COLEC10Q9Y6Z7 277 aa2.14□□□□□ -2.07
SMARCB1-208ENST00000634926 MXRA5Q9NR99 2828 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CREBBPQ92793 2442 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CCDC168Q8NDH2 2452 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A087WUV0 522 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 IGKV3D-20A0A0C4DH25 116 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP6AP2A0A1C7CYW4 349 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM172BPA6NC97 362 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 IGLON5A6NGN9 336 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MSGN1A6NI15 193 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NKX6-3A6NJ46 265 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 F8VZ95 297 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 K7EPI3 171 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 P2RY10O00398 339 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 KPNA3O00505 521 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TRAFD1O14545 582 aaPredicted RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CHEK1O14757 476 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NDC80O14777 642 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CHUKO15111 745 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MLNRO43193 412 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 MED7O43513 233 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NUDT21O43809 227 aaKnown RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 FGF17O60258 216 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NME2P1O60361 137 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CIDEAO60543 219 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CYTIPO60759 359 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 ATP6V1G1O75348 118 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 TNFSF15O95150 251 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 OR6A2O95222 327 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CPNE6O95741 557 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 LSM8O95777 96 aaKnown RBP2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 EML2O95834 649 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 NGFP01138 241 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 EPOP01588 193 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CRYAAP02489 173 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 CHRNGP07510 517 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 RHOCP08134 193 aa2.13□□□□□ -2.07
SMARCB1-208ENST00000634926 HOXC4P09017 264 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms