RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 IGLV3-12A0A075B6K2 115 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 A0A1W2PQM1 296 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 METTL15A6NJ78 407 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 SCDO00767 359 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 PPM1BO75688 479 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 UTS2O95399 124 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 SLC2A10O95528 541 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 NGFRP08138 427 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 UBL4AP11441 157 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 HPGDP15428 266 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 HOXD12P35452 270 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 CSTF1Q05048 431 aaKnown RBP20.26■□□□□ 0.83
PNKP-220ENST00000627232 EBPQ15125 230 aaKnown RBP20.26■□□□□ 0.83
PNKP-220ENST00000627232 NDUFAF6Q330K2 333 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 HLA-DQA1Q5Y7H0 255 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 RTL4Q6ZR62 310 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 CPOQ8IVL8 374 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 OR1N1Q8NGS0 311 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 MCFD2Q8NI22 146 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 IFT27Q9BW83 186 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 SLC19A3Q9BZV2 496 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 NXF2Q9GZY0 626 aaKnown RBP20.26■□□□□ 0.83
PNKP-220ENST00000627232 ENKD1Q9H0I2 346 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 COPS7AQ9UBW8 275 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 MKL2Q9ULH7 1088 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 CABIN1Q9Y6J0 2220 aa20.26■□□□□ 0.83
PNKP-220ENST00000627232 IGF2P01344 180 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 IGHA1P01876 353 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 CPEP16870 476 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 PSMA1P25786 263 aaKnown RBP20.25■□□□□ 0.83
PNKP-220ENST00000627232 SLC6A6P31641 620 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 SLC9A3P48764 834 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 PSPHP78330 225 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 FOXK2Q01167 660 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 SKP2Q13309 424 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 ZNF404Q494X3 552 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 WBP2NLQ6ICG8 309 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 THSD4Q6ZMP0 1018 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 OAFQ86UD1 273 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 MAML2Q8IZL2 1156 aaPredicted RBP20.25■□□□□ 0.83
PNKP-220ENST00000627232 PSD4Q8NDX1 1056 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 SGTBQ96EQ0 304 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 ZC3H10Q96K80 434 aaKnown RBP20.25■□□□□ 0.83
PNKP-220ENST00000627232 SLC7A5P2Q9GIP4 190 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 GAREM1Q9H706 876 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 STUB1Q9UNE7 303 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 CARD8Q9Y2G2 431 aa20.25■□□□□ 0.83
PNKP-220ENST00000627232 TRIOO75962 3097 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 IGHV5-10-1A0A0J9YXX1 117 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 GPX5O75715 221 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 CALRP27797 417 aaKnown RBP20.24■□□□□ 0.83
PNKP-220ENST00000627232 SOX3P41225 446 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 CRYZQ08257 329 aaKnown RBP20.24■□□□□ 0.83
PNKP-220ENST00000627232 CLPPQ16740 277 aaPredicted RBP20.24■□□□□ 0.83
PNKP-220ENST00000627232 NIPAL3Q6P499 406 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 MEPCEQ7L2J0 689 aaKnown RBP20.24■□□□□ 0.83
PNKP-220ENST00000627232 SLC29A4Q7RTT9 530 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 PHC2Q8IXK0 858 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 C9orf40Q8IXQ3 194 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 C17orf47Q8NEP4 570 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 C3orf49Q96BT1 292 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 HSPBAP1Q96EW2 488 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 SIAEQ9HAT2 523 aa20.24■□□□□ 0.83
PNKP-220ENST00000627232 ADAMTS9Q9P2N4 1935 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 TRAV27A0A087WT01 109 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 RIIAD1A6NNX1 92 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 SOCS6O14544 535 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 ZNF264O43296 627 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 CFIP05156 583 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 LIMS3P0CW19 117 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 LIMS4P0CW20 117 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 PNMTP11086 282 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 SLC1A3P43003 542 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 TPBGQ13641 420 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 FHL1Q13642 323 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 CD226Q15762 336 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 C16orf87Q6PH81 154 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 LAPTM4BQ86VI4 370 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 C1orf210Q8IVY1 113 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 BBS1Q8NFJ9 593 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 OR51A7Q8NH64 312 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 CEP76Q8TAP6 659 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 PHOSPHO1Q8TCT1 267 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 LRFN5Q96NI6 719 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 TNFRSF13CQ96RJ3 184 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 GAL3ST4Q96RP7 486 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 WWTR1Q9GZV5 400 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 MCCC2Q9HCC0 563 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 FSCN3Q9NQT6 498 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 SLC22A11Q9NSA0 550 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 CTSFQ9UBX1 484 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 RARRES3Q9UL19 164 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 CORINQ9Y5Q5 1042 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 HEATR5AQ86XA9 2040 aa20.23■□□□□ 0.83
PNKP-220ENST00000627232 A0A1W2PQD3 144 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 GTPBP1O00178 669 aaKnown RBP20.22■□□□□ 0.83
PNKP-220ENST00000627232 TSPAN2O60636 221 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 ONECUT2O95948 504 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 HK1P19367 917 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 CRYBB2P43320 205 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms