RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 NEK6Q9HC98 313 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ADAP2Q9NPF8 381 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 VPS13AQ96RL7 3174 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 A0A1W2PQL4 384 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 A6NL46 340 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 SGK494L7N484 410 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CYR61O00622 381 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 PLA2G10O15496 165 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 FOXS1O43638 330 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 FCMRO60667 390 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 HTR2AP28223 471 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 NOS3P29474 1203 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 SDC2P34741 201 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CD79BP40259 229 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 AFF3P51826 1226 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CDH11P55287 796 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 MRPS21P82921 87 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CD83Q01151 205 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 FOXK2Q01167 660 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 RPL6Q02878 288 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 RUNX2Q13950 521 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 DDI2Q5TDH0 399 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 TMEM91Q6ZNR0 172 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 THNSL2Q86YJ6 484 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 RPS4Y2Q8TD47 263 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 LCN9Q8WX39 176 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 AP3S1Q92572 193 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ACTR10Q9NZ32 417 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 KCNE5Q9UJ90 142 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 MRPS7Q9Y2R9 242 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 R4GN57 208 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ASXL3Q9C0F0 2248 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 SHISA3A0PJX4 238 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 HMX3A6NHT5 357 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CDC42EP2O14613 210 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 P2RX6O15547 441 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 PTP4A3O75365 173 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 TRIM3O75382 744 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 SOX30O94993 753 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 AK1P00568 194 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF888P0CJ79 500 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CPMP14384 443 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 DRD5P21918 477 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 TCEA1P23193 301 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 HLA-DMAP28067 261 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 FOXK1P85037 733 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 DBPQ10586 325 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 CCINQ13939 588 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 GAS6Q14393 721 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 LTB4RQ15722 352 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF791Q3KP31 576 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 GARNL3Q5VVW2 1013 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 NIPAL3Q6P499 406 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF322Q6U7Q0 402 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 WDR88Q6ZMY6 472 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 GID4Q8IVV7 300 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF619Q8N2I2 560 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC16A11Q8NCK7 471 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF486Q96H40 463 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 NEDD4LQ96PU5 975 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 TTYH2Q9BSA4 534 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 TTTY10Q9BZA0 68 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 OR51V1Q9H2C8 321 aa6.64□□□□□ -1.35
CTNNA1-244ENST00000627109 SPAG17Q6Q759 2223 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 A0A0B4J293 547 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 CDHR4A6H8M9 788 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 FAM183AA6NL82 134 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 CHST10O43529 356 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 HYAL3O43820 417 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 TSC22D2O75157 780 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 NTN1O95631 604 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 HMGN1P05114 100 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 NID1P14543 1247 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 GNSP15586 552 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 CAPZA2P47755 286 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 SF3B4Q15427 424 aaKnown RBP eCLIP6.63□□□□□ -1.351e-6■■■■■ 27.7
CTNNA1-244ENST00000627109 DUSP5Q16690 384 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 PRICKLE4Q2TBC4 344 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 SNAP47Q5SQN1 464 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF362Q5T0B9 420 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 DGLUCYQ7Z3D6 616 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 PXKQ7Z7A4 578 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 C1orf210Q8IVY1 113 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 GHDCQ8N2G8 530 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 SPEM1Q8N4L4 309 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 SYT14Q8NB59 555 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC2A12Q8TD20 617 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 OR1E3Q8WZA6 343 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 CDS1Q92903 461 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 RNF31Q96EP0 1072 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 DCLRE1CQ96SD1 692 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 OR2B2Q9GZK3 357 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 RNF32Q9H0A6 362 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 TRPV5Q9NQA5 729 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 MAT2BQ9NZL9 334 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 MMP17Q9ULZ9 603 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 BOLA1Q9Y3E2 137 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 CSNK1G3Q9Y6M4 447 aa6.63□□□□□ -1.35
CTNNA1-244ENST00000627109 A0A1W2PPH5 198 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms