RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 WDR60Q8WVS4 1066 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 CNOT9Q92600 299 aaKnown RBP15.04■□□□□ -0
UBE3D-208ENST00000626828 RNASE6Q93091 150 aaKnown RBP15.04■□□□□ -0
UBE3D-208ENST00000626828 ZNF524Q96C55 264 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 TMEM19Q96HH6 336 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 KLHL15Q96M94 604 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 PIGMQ9H3S5 423 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 ARMC7Q9H6L4 198 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 CACYBPQ9HB71 228 aaKnown RBP15.04■□□□□ -0
UBE3D-208ENST00000626828 BCL2L10Q9HD36 194 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 A4GALTQ9NPC4 353 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 JKAMPQ9P055 326 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 KLHL14Q9P2G3 628 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 MCTS1Q9ULC4 181 aaKnown RBP15.04■□□□□ -0
UBE3D-208ENST00000626828 IFT52Q9Y366 437 aa15.04■□□□□ -0
UBE3D-208ENST00000626828 TRBV5-3A0A0A0MS03 114 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 CLDN24A6NM45 220 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 C5orf58C9J3I9 102 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 CXCL13O43927 109 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 FCGR2AP12318 317 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 FKBP2P26885 142 aaKnown RBP15.03■□□□□ -0
UBE3D-208ENST00000626828 SFTPDP35247 375 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 APOBEC1P41238 236 aaKnown RBP15.03■□□□□ -0
UBE3D-208ENST00000626828 SELENBP1Q13228 472 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 LARS2Q15031 903 aaKnown RBP15.03■□□□□ -0
UBE3D-208ENST00000626828 CTU2Q2VPK5 515 aaKnown RBP15.03■□□□□ -0
UBE3D-208ENST00000626828 RUNDC3AQ59EK9 446 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 CGB2Q6NT52 195 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 ZNF440Q8IYI8 595 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 GCNT2Q8N0V5 402 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 ATP6V1C2Q8NEY4 427 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 ZNF317Q96PQ6 595 aaPredicted RBP15.03■□□□□ -0
UBE3D-208ENST00000626828 TMEM185BQ9H7F4 350 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 RNF122Q9H9V4 155 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.03■□□□□ -0
UBE3D-208ENST00000626828 ABCA12Q86UK0 2595 aa15.03■□□□□ -0
UBE3D-208ENST00000626828 DSPPQ9NZW4 1301 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 A0A1W2PNV4 684 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 TNFSF11O14788 317 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 BCAS1O75363 584 aaPredicted RBP15.02■□□□□ -0
UBE3D-208ENST00000626828 THBS1P07996 1170 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 NUDT7P0C024 238 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 PABPC4LP0CB38 370 aaKnown RBP15.02■□□□□ -0
UBE3D-208ENST00000626828 ADSLP30566 484 aaPredicted RBP15.02■□□□□ -0
UBE3D-208ENST00000626828 UQCRC1P31930 480 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 HTR3AP46098 478 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 DLX5P56178 289 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 MERTKQ12866 999 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 SF3A3Q12874 501 aaKnown RBP eCLIP15.02■□□□□ -0
UBE3D-208ENST00000626828 LIN52Q52LA3 116 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 MRPL2Q5T653 305 aaKnown RBP15.02■□□□□ -0
UBE3D-208ENST00000626828 PLEKHM3Q6ZWE6 761 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 KIF18BQ86Y91 864 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 REXO5Q96IC2 774 aaKnown RBP15.02■□□□□ -0
UBE3D-208ENST00000626828 SAR1AQ9NR31 198 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 GLRX2Q9NS18 164 aa15.02■□□□□ -0
UBE3D-208ENST00000626828 DNAJB12Q9NXW2 375 aaKnown RBP15.02■□□□□ -0
UBE3D-208ENST00000626828 ADGRG4Q8IZF6 3080 aa15.02□□□□□ -0.01
UBE3D-208ENST00000626828 CDHR4A6H8M9 788 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 CFAP73A6NFT4 308 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 EEF1E1-BLOC1S5C9J1V9 151 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 FAAHO00519 579 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 EEF1E1O43324 174 aaKnown RBP15.01□□□□□ -0.01
UBE3D-208ENST00000626828 TNFSF13O75888 250 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 AQP8O94778 261 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 PGM3O95394 542 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 UQCRBP14927 111 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 ETS2P15036 469 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 SSTR2P30874 369 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 KIR2DL2P43627 348 aaPredicted RBP15.01□□□□□ -0.01
UBE3D-208ENST00000626828 IDH2P48735 452 aaKnown RBP15.01□□□□□ -0.01
UBE3D-208ENST00000626828 GCNT6Q5T4J0 391 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 REEP3Q6NUK4 255 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 PPP4R4Q6NUP7 873 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 GRINAQ7Z429 371 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 GDF7Q7Z4P5 450 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 DHDDSQ86SQ9 333 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 RETREG3Q86VR2 466 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 VRK2Q86Y07 508 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 ZNF295-AS1Q8N0V1 137 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 CNEP1R1Q8N9A8 125 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 BBS10Q8TAM1 723 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 MAL2Q969L2 176 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 CPNE4Q96A23 557 aaPredicted RBP15.01□□□□□ -0.01
UBE3D-208ENST00000626828 STARD4Q96DR4 205 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 C14orf79Q96F83 325 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 ANKRD27Q96NW4 1050 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 CGREF1Q99674 301 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 SPATA9Q9BWV2 254 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 TMEM38AQ9H6F2 299 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 KCNN3Q9UGI6 736 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 PACSIN3Q9UKS6 424 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 SPIN1Q9Y657 262 aaPredicted RBP15.01□□□□□ -0.01
UBE3D-208ENST00000626828 ANKHD1Q8IWZ3 2542 aaKnown RBP15.01□□□□□ -0.01
UBE3D-208ENST00000626828 CREBBPQ92793 2442 aa15.01□□□□□ -0.01
UBE3D-208ENST00000626828 A8MXE2 369 aa15□□□□□ -0.01
UBE3D-208ENST00000626828 MSTNO14793 375 aa15□□□□□ -0.01
UBE3D-208ENST00000626828 ARAFP10398 606 aa15□□□□□ -0.01
UBE3D-208ENST00000626828 PRF1P14222 555 aa15□□□□□ -0.01
UBE3D-208ENST00000626828 SLC6A2P23975 617 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms