RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 OR1L3Q8NH93 324 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 TMEM203Q969S6 136 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 KCNS3Q9BQ31 491 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 PNO1Q9NRX1 252 aaKnown RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 ITGB1BP2Q9UKP3 347 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 BAIAP2Q9UQB8 552 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC35A3Q9Y2D2 325 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 MN1Q10571 1320 aaPredicted RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 IGKV3D-11A0A0A0MRZ8 115 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC30A4O14863 429 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 PLD2O14939 933 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 POLR1CO15160 346 aaPredicted RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 PAICSP22234 425 aaKnown RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 TGM1P22735 817 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 CSF2RBP32927 897 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 RPS25P62851 125 aaKnown RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 FHL1Q13642 323 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 ARMC4Q5T2S8 1044 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 RTL4Q6ZR62 310 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 CCDC190Q86UF4 302 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 OR51G2Q8NGK0 314 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 OIT3Q8WWZ8 545 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC41A2Q96JW4 573 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 MED20Q9H944 212 aa18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 DHCR7Q9UBM7 475 aaKnown RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 YARS2Q9Y2Z4 477 aaKnown RBP18.13■□□□□ 0.49
PCDHB11-202ENST00000624887 PNMA8CA0A1B0GUJ8 204 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 FUOMA2VDF0 154 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 ISPDA4D126 451 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 BOLA2-SMG1P6H3BVE0 249 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 CTDSP2O14595 271 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 LALBAP00709 142 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 IL1AP01583 271 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 PPICP45877 212 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 GPR143P51810 404 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 CRYZQ08257 329 aaKnown RBP18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 DMWDQ09019 674 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF181Q2M3W8 571 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 NDUFAF6Q330K2 333 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 SNAP47Q5SQN1 464 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF362Q5T0B9 420 aaPredicted RBP18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 PLEKHG7Q6ZR37 379 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 TMEM151BQ8IW70 566 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF440Q8IYI8 595 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 OR4C6Q8NH72 309 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 PTP4A1Q93096 173 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 NACC2Q96BF6 587 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 C1GALT1C1Q96EU7 318 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC46A1Q96NT5 459 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 TNFRSF13CQ96RJ3 184 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 HCAR1Q9BXC0 346 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 MCCC2Q9HCC0 563 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 SNTG1Q9NSN8 517 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 UGT2A1Q9Y4X1 527 aa18.12■□□□□ 0.49
PCDHB11-202ENST00000624887 SYNDIG1LA6NDD5 238 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 PRR23D1E9PI22 279 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 AKAP8O43823 692 aaKnown RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 PRR23D2P0DMB1 279 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 FOLR1P15328 257 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 BCAP31P51572 246 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SPANXN2Q5MJ10 180 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 C22orf42Q6IC83 251 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 CD200R1LQ6Q8B3 271 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 GATAD2AQ86YP4 633 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 GPR135Q8IZ08 494 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF321PQ8N8H1 164 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 Q8N9G6 341 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC37A3Q8NCC5 494 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 DNAJA4Q8WW22 397 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 TSLPQ969D9 159 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 KISS1RQ969F8 398 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 EFHD2Q96C19 240 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 LMF1Q96S06 567 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 IER2Q9BTL4 223 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 HOXD1Q9GZZ0 328 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SMURF1Q9HCE7 757 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 LAMA1P25391 3075 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 A0A087WUJ7 227 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC22A31A6NKX4 558 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 RIIAD1A6NNX1 92 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 DYRK3O43781 588 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 CDRT1O95170 752 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 MSL3P1P0C860 447 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 PEPDP12955 493 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 FGF9P31371 208 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC6A6P31641 620 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ADH7P40394 386 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF791Q3KP31 576 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 CRTC2Q53ET0 693 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 PRAMEF17Q5VTA0 474 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ZNF322Q6U7Q0 402 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 B3GLCTQ6Y288 498 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 PRSS42Q7Z5A4 293 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 LYSMD2Q8IV50 215 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 ACBD7Q8N6N7 88 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 FAM71CQ8NEG0 241 aa18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SPRYD4Q8WW59 207 aaPredicted RBP18.11■□□□□ 0.49
PCDHB11-202ENST00000624887 SLC25A46Q96AG3 418 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms