RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ETFDHQ16134 617 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 OR4C11Q6IEV9 310 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 APOOLQ6UXV4 268 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 TMUB2Q71RG4 321 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 CCDC116Q8IYX3 515 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 OR56A1Q8NGH5 318 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 ELP4Q96EB1 424 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 TEAD3Q99594 435 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 ADGRL4Q9HBW9 690 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 NOX3Q9HBY0 568 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 GPR160Q9UJ42 338 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 PRRC2BQ5JSZ5 2229 aaKnown RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 NAP1L6A6NFF2 107 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 LEFTY2O00292 366 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 ARPC5O15511 151 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 OR1F1O43749 312 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 POP7O75817 140 aaKnown RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 SNAPC5O75971 98 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 ECDO95905 644 aaPredicted RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 SBK2P0C263 348 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 MAZP56270 477 aaKnown RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 SEC61A1P61619 476 aaKnown RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 TCTN1Q2MV58 587 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 ZNF793Q6ZN11 406 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 GAREM2Q75VX8 874 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 OR52L1Q8NGH7 329 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 ARMC5Q96C12 935 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 WASH6PQ9NQA3 447 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 PCDHB16Q9NRJ7 776 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 AKAP7Q9P0M2 348 aaPredicted RBP13.08□□□□□ -0.32
LDB3-209ENST00000623056 NTMQ9P121 344 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 COPS3Q9UNS2 423 aa13.08□□□□□ -0.32
LDB3-209ENST00000623056 A0A1W2PS29 197 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NRG2O14511 850 aaPredicted RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 CREBL2O60519 120 aaPredicted RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 TYRP14679 529 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 GABRA1P14867 456 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 IL9P15248 144 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 RAB3AP20336 220 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NT5EP21589 574 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 TRA2BP62995 288 aaKnown RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 SLC7A9P82251 487 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 AGERQ15109 404 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 FAM46CQ5VWP2 391 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 SSX6Q7RTT6 188 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 TTLQ8NG68 377 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 OR1S1Q8NH92 325 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 THEM6Q8WUY1 208 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 ST8SIA2Q92186 375 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 CNRIP1Q96F85 164 aaPredicted RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 DERL3Q96Q80 235 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 TRMT61BQ9BVS5 477 aaKnown RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 DPEP2Q9H4A9 486 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 TAS2R5Q9NYW4 299 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 FBXL3Q9UKT7 428 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 ZNF175Q9Y473 711 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NEDD8-MDP1E9PL57 170 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 HOXA2O43364 376 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 FCMRO60667 390 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 SERPINA3P01011 423 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 C8orf89P0DMQ9 161 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 CLUP10909 449 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 PRG2P13727 222 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 SELPP16109 830 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 TEAD1P28347 426 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NOS3P29474 1203 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 AP3S2P59780 193 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 GRM7Q14831 915 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 LINC00303Q3SY05 128 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 ZNF626Q68DY1 528 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 FCRLBQ6BAA4 426 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 C17orf107Q6ZR85 190 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NAXDQ8IW45 347 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NRSN1Q8IZ57 195 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 LNX2Q8N448 690 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 CYB5D2Q8WUJ1 264 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 SMPDL3BQ92485 455 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 NPAS1Q99742 590 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 TTTY10Q9BZA0 68 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 AICDAQ9GZX7 198 aa13.07□□□□□ -0.32
LDB3-209ENST00000623056 KRCC1Q9NPI7 259 aaPredicted RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 SIDT1Q9NXL6 827 aaKnown RBP13.07□□□□□ -0.32
LDB3-209ENST00000623056 KLK11Q9UBX7 282 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms