RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 M0R129 80 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 BHLHE40O14503 412 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 CDC42EP2O14613 210 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 IDH3BO43837 385 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 ALOX12BO75342 701 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 REM1O75628 298 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 MYF5P13349 255 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 ZNF3P17036 446 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 PSMA1P25786 263 aaKnown RBP15.02□□□□□ -0.01
LDB3-208ENST00000623007 LSM11P83369 360 aaKnown RBP eCLIP15.02□□□□□ -0.01
LDB3-208ENST00000623007 PLCXD2Q0VAA5 305 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 POU4F2Q12837 409 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 ZNF829Q3KNS6 432 aaPredicted RBP15.02□□□□□ -0.01
LDB3-208ENST00000623007 CLEC12AQ5QGZ9 265 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 C19orf48Q6RUI8 117 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 WDR88Q6ZMY6 472 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 OR52I1Q8NGK6 324 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 PHOSPHO1Q8TCT1 267 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 EFHD2Q96C19 240 aaPredicted RBP15.02□□□□□ -0.01
LDB3-208ENST00000623007 RNFT2Q96EX2 444 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 GAL3ST4Q96RP7 486 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 CMC2Q9NRP2 79 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 UNC13CQ8NB66 2214 aa15.02□□□□□ -0.01
LDB3-208ENST00000623007 PI4KAP42356 2102 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 OR2W5A6NFC9 320 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 ELOA3DA6NLF2 546 aaPredicted RBP15.01□□□□□ -0.01
LDB3-208ENST00000623007 A8MUA0 341 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 IDSB3KWA1 339 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 TSPAN2O60636 221 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 PTP4A3O75365 173 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 NDUFB2O95178 105 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 CDK4P11802 303 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 HK1P19367 917 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 MAKP20794 623 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 LIPAP38571 399 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 SKP2Q13309 424 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 NNATQ16517 81 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 ELOA3BQ3SY89 546 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 C5orf46Q6UWT4 87 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 ZNF441Q8N8Z8 693 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 ELOA3Q8NG57 546 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 OR4Q3Q8NH05 313 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 PFN4Q8NHR9 129 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 LIPHQ8WWY8 451 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 BORCS5Q969J3 196 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 SYNDIG1Q9H7V2 258 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 MEPEQ9NQ76 525 aaPredicted RBP15.01□□□□□ -0.01
LDB3-208ENST00000623007 KLHL21Q9UJP4 597 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 EXOGQ9Y2C4 368 aaKnown RBP15.01□□□□□ -0.01
LDB3-208ENST00000623007 LSM2Q9Y333 95 aaKnown RBP15.01□□□□□ -0.01
LDB3-208ENST00000623007 ZNF337Q9Y3M9 751 aa15.01□□□□□ -0.01
LDB3-208ENST00000623007 ARID1BQ8NFD5 2236 aaPredicted RBP15□□□□□ -0.01
LDB3-208ENST00000623007 CDC40O60508 579 aaKnown RBP eCLIP15□□□□□ -0.01
LDB3-208ENST00000623007 KLK3P07288 261 aaPredicted RBP15□□□□□ -0.01
LDB3-208ENST00000623007 PEPDP12955 493 aa15□□□□□ -0.01
LDB3-208ENST00000623007 PGCP20142 388 aa15□□□□□ -0.01
LDB3-208ENST00000623007 EMP2P54851 167 aa15□□□□□ -0.01
LDB3-208ENST00000623007 WNT4P56705 351 aa15□□□□□ -0.01
LDB3-208ENST00000623007 SPCS2Q15005 226 aa15□□□□□ -0.01
LDB3-208ENST00000623007 PHF19Q5T6S3 580 aa15□□□□□ -0.01
LDB3-208ENST00000623007 PWWP2BQ6NUJ5 590 aa15□□□□□ -0.01
LDB3-208ENST00000623007 KIRREL2Q6UWL6 708 aa15□□□□□ -0.01
LDB3-208ENST00000623007 HSDL2Q6YN16 418 aa15□□□□□ -0.01
LDB3-208ENST00000623007 CXXC5Q7LFL8 322 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 TMPRSS9Q7Z410 1059 aa15□□□□□ -0.01
LDB3-208ENST00000623007 ANKRD37Q7Z713 158 aa15□□□□□ -0.01
LDB3-208ENST00000623007 C9orf40Q8IXQ3 194 aa15□□□□□ -0.01
LDB3-208ENST00000623007 TBC1D15Q8TC07 691 aa15□□□□□ -0.01
LDB3-208ENST00000623007 LPAR4Q99677 370 aa15□□□□□ -0.01
LDB3-208ENST00000623007 IFT27Q9BW83 186 aa15□□□□□ -0.01
LDB3-208ENST00000623007 TBL1XR1Q9BZK7 514 aa15□□□□□ -0.01
LDB3-208ENST00000623007 HMG20AQ9NP66 347 aa15□□□□□ -0.01
LDB3-208ENST00000623007 FBXO8Q9NRD0 319 aa15□□□□□ -0.01
LDB3-208ENST00000623007 C20orf141Q9NUB4 165 aa15□□□□□ -0.01
LDB3-208ENST00000623007 CTSFQ9UBX1 484 aa15□□□□□ -0.01
LDB3-208ENST00000623007 SLC6A5Q9Y345 797 aa15□□□□□ -0.01
LDB3-208ENST00000623007 TMX2-CTNND1H3BSU7 103 aa15□□□□□ -0.01
LDB3-208ENST00000623007 KHNYNO15037 678 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 FLRT2O43155 660 aa15□□□□□ -0.01
LDB3-208ENST00000623007 NDUFB5O43674 189 aa15□□□□□ -0.01
LDB3-208ENST00000623007 HSMCR30P0CW71 290 aa15□□□□□ -0.01
LDB3-208ENST00000623007 ACP1P24666 158 aa15□□□□□ -0.01
LDB3-208ENST00000623007 NOS3P29474 1203 aa15□□□□□ -0.01
LDB3-208ENST00000623007 SLC1A3P43003 542 aa15□□□□□ -0.01
LDB3-208ENST00000623007 TMED10P49755 219 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 NR0B1P51843 470 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 SLC26A5P58743 744 aa15□□□□□ -0.01
LDB3-208ENST00000623007 FOXK2Q01167 660 aa15□□□□□ -0.01
LDB3-208ENST00000623007 ZFP36L1Q07352 338 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 CRYZQ08257 329 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 AQP6Q13520 282 aa15□□□□□ -0.01
LDB3-208ENST00000623007 CBFBQ13951 182 aa15□□□□□ -0.01
LDB3-208ENST00000623007 PRAMEF17Q5VTA0 474 aa15□□□□□ -0.01
LDB3-208ENST00000623007 ZNF385CQ66K41 422 aaPredicted RBP15□□□□□ -0.01
LDB3-208ENST00000623007 ADCK1Q86TW2 530 aa15□□□□□ -0.01
LDB3-208ENST00000623007 TMEM105Q8N8V8 129 aa15□□□□□ -0.01
LDB3-208ENST00000623007 DYNC2LI1Q8TCX1 351 aa15□□□□□ -0.01
LDB3-208ENST00000623007 C3orf49Q96BT1 292 aa15□□□□□ -0.01
LDB3-208ENST00000623007 OMA1Q96E52 524 aa15□□□□□ -0.01
LDB3-208ENST00000623007 ADOQ96SZ5 270 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms