RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 NUDT4Q9NZJ9 180 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 FBXW11Q9UKB1 542 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 E7EQ34 232 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 GOSR2O14653 212 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 MBTPS2O43462 519 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ADAP00813 363 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 HOXB9P17482 250 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 RCC1P18754 421 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 IDSP22304 550 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 MNDAP41218 407 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 FOXO1Q12778 655 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 OR8G1Q15617 311 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ARSIQ5FYB1 569 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 XKR6Q5GH73 641 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 NKAPLQ5M9Q1 402 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 TAPT1Q6NXT6 567 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 OGFOD3Q6PK18 319 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 CPEB3Q8NE35 698 aaKnown RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 GPRC5AQ8NFJ5 357 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 OR1J4Q8NGS1 313 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 EEF1AKMT1Q8WVE0 214 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 GCDHQ92947 438 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 SCLYQ96I15 445 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 CLCC1Q96S66 551 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 TMEM138Q9NPI0 162 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 CTPS2Q9NRF8 586 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ST3GAL5Q9UNP4 418 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ASF1AQ9Y294 204 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 PCDHB11Q9Y5F2 797 aa7.38□□□□□ -1.23
VPS11-209ENST00000622309 ZFP37Q9Y6Q3 630 aaPredicted RBP7.38□□□□□ -1.23
VPS11-209ENST00000622309 FAM86C2PA6NEL3 165 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 NAP1L6A6NFF2 107 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 FAM227AF5H4B4 570 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 NARSO43776 548 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 MTX2O75431 263 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C22orf31O95567 290 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ZNF865P0CJ78 1059 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 HIST1H1BP16401 226 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 EN2P19622 333 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 STC1P52823 247 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 NHLH2Q02577 135 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ZP2Q05996 745 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PLA2G7Q13093 441 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 RSU1Q15404 277 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SF1Q15637 639 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 PTPRNQ16849 979 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C10orf91Q5T1B1 145 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 THEM4Q5T1C6 240 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 LIPJQ5W064 366 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C12orf73Q69YU5 71 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SLC25A24Q6NUK1 477 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C1orf94Q6P1W5 598 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PRSS45Q7RTY3 260 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PRICKLE2Q7Z3G6 844 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 RABEPKQ7Z6M1 372 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 IQCF1Q8N6M8 205 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ARIH2OSQ8N7S6 290 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 TNFAIP8L1Q8WVP5 186 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 GEMIN6Q8WXD5 167 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 SORCS1Q8WY21 1168 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ZNF354BQ96LW1 612 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 EGFL8Q99944 293 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 COLEC11Q9BWP8 271 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 GPR61Q9BZJ8 451 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 EGLN1Q9GZT9 426 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 HRASLSQ9HDD0 168 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 THSD1Q9NS62 852 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C19orf12Q9NSK7 152 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 GAR1Q9NY12 217 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 FBXL3Q9UKT7 428 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 FNDC3AQ9Y2H6 1198 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 NUP214P35658 2090 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 OR6C76A6NM76 312 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 B4E171 279 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 CXCL11O14625 94 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PPIHO43447 177 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 RGS9O75916 674 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 KLHL18O94889 574 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SLC25A27O95847 323 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 C6orf47O95873 294 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 GAAP10253 952 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ARF4P18085 180 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 AGTR1P30556 359 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PCGF2P35227 344 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 OR2B8PP59922 312 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SCAPQ12770 1279 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 RAB40BQ12829 278 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 PCBP2Q15366 365 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS11-209ENST00000622309 SYT14P1Q58G82 188 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 ADAM5Q6NVV9 412 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 SFXN4Q6P4A7 337 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 APOOLQ6UXV4 268 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 WDR53Q7Z5U6 358 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 GTPBP8Q8N3Z3 284 aaPredicted RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 PRR18Q8N4B5 295 aa7.37□□□□□ -1.23
VPS11-209ENST00000622309 CELF5Q8N6W0 485 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 SIDT2Q8NBJ9 832 aaKnown RBP7.37□□□□□ -1.23
VPS11-209ENST00000622309 UBAC2Q8NBM4 344 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms