RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NPBWR1P48145 328 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SUOXP51687 545 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 RPS13P62277 151 aaKnown RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LRRC73Q5JTD7 316 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 CST9LP1Q5W188 147 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LANCL3Q6ZV70 420 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 VGLL2Q8N8G2 317 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GIMAP1Q8WWP7 306 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PITX2Q99697 317 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SEMA4CQ9C0C4 833 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GALPQ9UBC7 116 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SLC38A8A6NNN8 435 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SURF4O15260 269 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 UGDHO60701 494 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 NIPSNAP2O75323 286 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ADH5P11766 374 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SLC14A1Q13336 389 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 UGCGQ16739 394 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 KHDC1LQ5JSQ8 128 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MANEALQ5VSG8 457 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 WDR5BQ86VZ2 330 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 STT3BQ8TCJ2 826 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 KLHDC7BQ96G42 594 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CCNL2Q96S94 520 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SEMA4GQ9NTN9 838 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MYOTQ9UBF9 498 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PCDHGC4Q9Y5F7 938 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 BLACEA4D250 179 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SAP18O00422 153 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TGM5O43548 720 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF623O75123 536 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM225BP0DP42 221 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ACP5P13686 325 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PSMB1P20618 241 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 DDCP20711 480 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 LAPTM4AQ15012 233 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TAC4Q86UU9 113 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 NUP43Q8NFH3 380 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR4E2Q8NGC2 313 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR52N2Q8NGI0 321 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR5M8Q8NGP6 311 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF566Q969W8 418 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 WDR77Q9BQA1 342 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SUCNR1Q9BXA5 334 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR8D2Q9GZM6 311 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR51B5Q9H339 312 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ANKRD19PQ9H560 264 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SCML1Q9UN30 329 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 Q9Y3F1 56 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TISP43B9A030 160 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 M0QZK8 103 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GGCTO75223 188 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR2C1O95371 312 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 EFNA1P20827 205 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 F2RL1P55085 397 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GLO1Q04760 184 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 DLX2Q07687 328 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF252P-AS1Q0IIN9 211 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ENDOGQ14249 297 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PPP1R3AQ16821 1122 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 IQCJQ1A5X6 159 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 HENMT1Q5T8I9 393 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 IRF2BP1Q8IU81 584 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CNTN4Q8IWV2 1026 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR10Z1Q8NGY1 313 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 NDNFQ8TB73 568 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PRRC1Q96M27 445 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MAP3K3Q99759 626 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 AHDC1Q5TGY3 1603 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 XRN1Q8IZH2 1706 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR5H15A6NDH6 313 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR5H14A6NHG9 310 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR5H1A6NKK0 313 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR5K4A6NMS3 321 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GABARAPH6UMI1 98 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 RGS11O94810 467 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GABARAPO95166 117 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 KCNK5O95279 499 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 GIFP27352 417 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 SGCAQ16586 387 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ATPAF1Q5TC12 328 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PXDC1Q5TGL8 231 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CST9Q5W186 159 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 LYPD8Q6UX82 237 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 TFAP2CQ92754 450 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 MYADMQ96S97 322 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 NKX3-1Q99801 234 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 CRB3Q9BUF7 120 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR10A5Q9H207 317 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR10A2Q9H208 303 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 DPEP3Q9H4B8 488 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 ZBTB20Q9HC78 741 aaPredicted RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 PRDM9Q9NQV7 894 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 THSD1Q9NS62 852 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 KLK4Q9Y5K2 254 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 AFDNP55196 1824 aaKnown RBP6.75□□□□□ -1.33
COLCA1-205ENST00000620864 A0A1B0GVG6 124 aa6.75□□□□□ -1.33
COLCA1-205ENST00000620864 OR2F2O95006 317 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms