RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 HEXA-AS1Q9H8Q6 139 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CENPMQ9NSP4 180 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SEMA4GQ9NTN9 838 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 FBXL4Q9UKA2 621 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 EXOSC1Q9Y3B2 195 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 COLEC10Q9Y6Z7 277 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 A0A1W2PP55 124 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ANKRD61A6NGH8 418 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 FCMRO60667 390 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NTSR1P30989 418 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 FGF9P31371 208 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TRHRP34981 398 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GCGRP47871 477 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 DNASE1L1P49184 302 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GAS1P54826 345 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 FGL2Q14314 439 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF234Q14588 700 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GRM7Q14831 915 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 STK11Q15831 433 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SCGB2B2Q4G0G5 96 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ENPP7Q6UWV6 458 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TDHQ8IZJ6 230 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 C17orf47Q8NEP4 570 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 RPLP0P6Q8NHW5 317 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NEK7Q8TDX7 302 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM255BQ8WV15 326 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 RBPMSQ93062 196 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 FBXW5Q969U6 566 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NXPE2Q96DL1 559 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ELMOD3Q96FG2 381 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CD180Q99467 661 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SEC22CQ9BRL7 303 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NDC1Q9BTX1 674 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ALG8Q9BVK2 526 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 HCAR1Q9BXC0 346 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ENKD1Q9H0I2 346 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GHITMQ9H3K2 345 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 MCCC2Q9HCC0 563 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TRIM36Q9NQ86 728 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 RBM7Q9Y580 266 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 MAB21L2Q9Y586 359 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SCN10AQ9Y5Y9 1956 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 BLOC1S5-TXNDC5H3BN57 136 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 L7N2F9 121 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 RNF13O43567 381 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 LILRB3O75022 631 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SOX30O94993 753 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SIX6O95475 246 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TPOP07202 933 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GIMD1P0DJR0 217 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ICAM2P13598 275 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GSTM3P21266 225 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 VAMP1P23763 118 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 LCN1P31025 176 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NAA10P41227 235 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 VEGFCP49767 419 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 BLKP51451 505 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 UBE2MP61081 183 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CAMK2DQ13557 499 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 KCNC3Q14003 757 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 LRRC37A5PQ49AS3 106 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SFXN4Q6P4A7 337 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF322Q6U7Q0 402 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TRILQ7L0X0 811 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 KCTD20Q7Z5Y7 419 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ARIH2OSQ8N7S6 290 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 OR5M3Q8NGP4 307 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 OR2A12Q8NGT7 310 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 OR5P2Q8WZ92 322 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TTC9Q92623 222 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ZC3HAV1LQ96H79 300 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GPR137Q96N19 417 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SFXN2Q96NB2 322 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SOSTQ9BQB4 213 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 MED18Q9BUE0 208 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 DPH1Q9BZG8 443 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GSX2Q9BZM3 304 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SLC6A15Q9H2J7 730 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 C8orf33Q9H7E9 229 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NEUROD4Q9HD90 331 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 DUXAA6NLW8 204 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GMDSO60547 372 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 EPPINO95925 133 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 APOC3P02656 99 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 WNT1P04628 370 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 CD2P06729 351 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GLULP15104 373 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 PCSK2P16519 638 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 BTCP35070 178 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 PDE7AQ13946 482 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 C1orf94Q6P1W5 598 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ACBD7Q8N6N7 88 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 MORN4Q8NDC4 146 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GLIPR2Q9H4G4 154 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 TM7SF3Q9NS93 570 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 GNG8Q9UK08 70 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 FBXL3Q9UKT7 428 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 SLC5A10A0PJK1 596 aa6.47□□□□□ -1.37
NEDD9-216ENST00000620854 LINC00862A6NCI5 91 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms