RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 GPR68Q15743 365 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 BCL2A1Q16548 175 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SYPL1Q16563 259 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 MLANAQ16655 118 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 AGKQ53H12 422 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 PDZK1Q5T2W1 519 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 LRIF1Q5T3J3 769 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 POMZP3Q6PJE2 187 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 DLEU7Q6UYE1 221 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 B3GNT6Q6ZMB0 384 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 FRRS1Q6ZNA5 592 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 C16orf62Q7Z3J2 963 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ADGRE4PQ86SQ3 457 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 MISPQ8IVT2 679 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 PM20D2Q8IYS1 436 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 EID3Q8N140 333 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 C10orf111Q8N326 155 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF527Q8NB42 609 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TNIP2Q8NFZ5 429 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 OR5M1Q8NGP8 315 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 B4GALNT2Q8NHY0 566 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 POC1BQ8TC44 478 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 PHOSPHO1Q8TCT1 267 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 ZPLD1Q8TCW7 415 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 RND1Q92730 232 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SPDL1Q96EA4 605 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 AURKBQ96GD4 344 aaPredicted RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SH3YL1Q96HL8 342 aaPredicted RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 SFXN2Q96NB2 322 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TRNT1Q96Q11 434 aaKnown RBP5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TUBA1CQ9BQE3 449 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 CDADC1Q9BWV3 514 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 RABEP2Q9H5N1 569 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 TPT1P8Q9HAU6 139 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 HHATLQ9HCP6 504 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 POLE3Q9NRF9 147 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 Q9UFV3 132 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 DKKL1Q9UK85 242 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 LIPT1Q9Y234 373 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 RNF6Q9Y252 685 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 CARD8Q9Y2G2 431 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 GMEB1Q9Y692 573 aa5.88□□□□□ -1.47
BRCC3-209ENST00000620502 MYO7BQ6PIF6 2116 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 DNAJC13O75165 2243 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 A0A087WZY1 265 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 C7orf72A4D263 438 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 SERINC4A6NH21 518 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 AGAP5A6NIR3 686 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 MBD3L5A6NJ08 208 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CD8B2A6NJW9 211 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CYSRT1A8MQ03 144 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 H0YC42 278 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CLIC1O00299 241 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 NR5A2O00482 541 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF264O43296 627 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 HCRTR2O43614 444 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 EIF4E2O60573 245 aaKnown RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 BCAS1O75363 584 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 H6PDO95479 791 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CLDN14O95500 239 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 ANP32DO95626 131 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CHRM4P08173 479 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 LINGO3P0C6S8 592 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 TROVE2P10155 538 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 PEPDP12955 493 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 IL11P20809 199 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 RPS4Y1P22090 263 aaKnown RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CEACAM8P31997 349 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 GCKP35557 465 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 TIMP3P35625 211 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 PGM1P36871 562 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CRATP43155 626 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 P2RX1P51575 399 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 TPD52P55327 224 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 SRYQ05066 204 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 SF3A3Q12874 501 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 SKP2Q13309 424 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 FGFBP1Q14512 234 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 RGNQ15493 299 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 TOMM34Q15785 309 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 ZNF630Q2M218 657 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 PLPPR5Q32ZL2 321 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 NDUFAF6Q330K2 333 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 GPAT3Q53EU6 434 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 C6orf10Q5SRN2 563 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 ATAD3BQ5T9A4 648 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 RIPPLY2Q5TAB7 128 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 NSUN5P2Q63ZY6 315 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 SP5Q6BEB4 398 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 AAGABQ6PD74 315 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 ENPP6Q6UWR7 440 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 PLXDC2Q6UX71 529 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 LRRC74BQ6ZQY2 392 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 HMGN2P46Q86SG4 172 aa5.87□□□□□ -1.47
BRCC3-209ENST00000620502 CCDC71Q8IV32 467 aaPredicted RBP5.87□□□□□ -1.47
BRCC3-209ENST00000620502 LIX1LQ8IVB5 337 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms