RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CDH20Q9HBT6 801 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 DNMT3BQ9UBC3 853 aaKnown RBP7.81□□□□□ -1.16
ALMS1-208ENST00000620466 DIMT1Q9UNQ2 313 aaKnown RBP7.81□□□□□ -1.16
ALMS1-208ENST00000620466 NPC1O15118 1278 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 PRAMEF2O60811 474 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 SLC2A5P22732 501 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 EIF2DP41214 584 aaKnown RBP7.81□□□□□ -1.16
ALMS1-208ENST00000620466 GIPRP48546 466 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 POU3F4P49335 361 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 REEP5Q00765 189 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 BDH1Q02338 343 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 OXA1LQ15070 435 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 NSDHLQ15738 373 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 DEFB133Q30KQ1 61 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 MTFR2Q6P444 385 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 GAREM2Q75VX8 874 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 ARRDC3Q96B67 414 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 MYADMQ96S97 322 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 INSM2Q96T92 566 aaPredicted RBP7.81□□□□□ -1.16
ALMS1-208ENST00000620466 ARL6Q9H0F7 186 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 MED20Q9H944 212 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 NTN4Q9HB63 628 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 ADAM29Q9UKF5 820 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 EVPLQ92817 2033 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 SGK494L7N484 410 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 CLEC2LP0C7M8 214 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 CD79AP11912 226 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 PRICKLE2Q7Z3G6 844 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 COMTD1Q86VU5 262 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 LACC1Q8IV20 430 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 ZNF740Q8NDX6 193 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 SYNPRQ8TBG9 265 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 NEURL3Q96EH8 262 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 OR51B6Q9H340 312 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 FBRSQ9HAH7 460 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 BABAM2Q9NXR7 383 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 CORINQ9Y5Q5 1042 aa7.81□□□□□ -1.16
ALMS1-208ENST00000620466 FER1L6Q2WGJ9 1857 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 SHOXO15266 292 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 PAHP00439 452 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 XCR1P46094 333 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 CTXN1P60606 82 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 CHRNEQ04844 493 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 EXOSC7Q15024 291 aaKnown RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 FAM205BPQ63HN1 556 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 BHLHA9Q7RTU4 235 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 DNAJC5GQ8N7S2 189 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 RCBTB1Q8NDN9 531 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 SYNPO2LQ9H987 977 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 ACTR10Q9NZ32 417 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 OSGIN1Q9UJX0 560 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 B3GALT1Q9Y5Z6 326 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 TMEM14AQ9Y6G1 99 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 BORCS7-ASMTA0A0B4J1R7 106 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 GFRA2O00451 464 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 TFP02787 698 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 LPLP06858 475 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 THBS2P35442 1172 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 AQP6Q13520 282 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 PPA1Q15181 289 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 CCDC58Q4VC31 144 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 DHRS4L2Q6PKH6 230 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 FAM198BQ6UWH4 519 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 KIF18BQ86Y91 864 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 PRR18Q8N4B5 295 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 OR52R1Q8NGF1 315 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 TM9SF4Q92544 642 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 TXNDC15Q96J42 360 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 URM1Q9BTM9 101 aaKnown RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 MS4A8Q9BY19 250 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 C17orf113A0A1B0GUU1 675 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 DIRAS3O95661 229 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 TSPAN12O95859 305 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 NPPBP16860 134 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 ZNF28P17035 718 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 SLC6A12P48065 614 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 EIF2B1Q14232 305 aaKnown RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 POU4F3Q15319 338 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 LRRC28Q86X40 367 aaPredicted RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 MFSD9Q8NBP5 474 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 ZNF419Q96HQ0 510 aaPredicted RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 RPH3AQ9Y2J0 694 aaPredicted RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 PRR35P0CG20 571 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 S100PP25815 95 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 SLC1A3P43003 542 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 MRPL58Q14197 206 aaKnown RBP7.8□□□□□ -1.16
ALMS1-208ENST00000620466 PCGF3Q3KNV8 242 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 ZNF385BQ569K4 471 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 CYHR1Q6ZMK1 362 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 ZNF765Q7L2R6 523 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 OLIG3Q7RTU3 272 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 MMP21Q8N119 569 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 SNAPC3Q92966 411 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 BMFQ96LC9 184 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 LMAN1LQ9HAT1 526 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 PPP1R14DQ9NXH3 145 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 TAS2R3Q9NYW6 316 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 KCMF1Q9P0J7 381 aa7.8□□□□□ -1.16
ALMS1-208ENST00000620466 ABRACLQ9P1F3 81 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms