RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 KAT8Q9H7Z6 458 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ZDHHC11Q9H8X9 412 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 IL1RL2Q9HB29 575 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 NTN4Q9HB63 628 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ACKR4Q9NPB9 350 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 IL1RAPQ9NPH3 570 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 EQTNQ9NQ60 294 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 KLHL1Q9NR64 748 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SACM1LQ9NTJ5 587 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 FAM120CQ9NX05 1096 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TAS2R9Q9NYW1 312 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC25A37Q9NYZ2 338 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 B4GALT7Q9UBV7 327 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 BTNL2Q9UIR0 455 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MRTO4Q9UKD2 239 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 BOKQ9UMX3 212 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SH3GLB1Q9Y371 365 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MRPS18CQ9Y3D5 142 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 UGT2A1Q9Y4X1 527 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 CHCHD2Q9Y6H1 151 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 NCKAP5O14513 1909 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 AKAP9Q99996 3911 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 HEATR5AQ86XA9 2040 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CENPVL1A0A0U1RR11 272 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 LRRC3CA6NJW4 275 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF99A8MXY4 864 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CLDN25C9JDP6 229 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 H3BMQ9 156 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CXCR6O00574 342 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ZNHIT1O43257 154 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ASNA1O43681 348 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 MPZL2O60487 215 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SLC19A2O60779 497 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 COQ9O75208 318 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PPM1BO75688 479 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 IGHG3P01860 377 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 HMGN2P05204 90 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 INHBBP09529 407 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CYP4B1P13584 511 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ETS2P15036 469 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GPX2P18283 190 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GNLYP22749 145 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 MST1P26927 711 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GABRA3P34903 492 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GPC1P35052 558 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 UGT2B10P36537 528 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PIGAP37287 484 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RFC3P40938 356 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CA7P43166 264 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 DNASE1L1P49184 302 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CCT3P49368 545 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RNF144AP50876 292 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PRKAG1P54619 331 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GAS1P54826 345 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GPR85P60893 370 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ISL1P61371 349 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RBBP4Q09028 425 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 FOXO1Q12778 655 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 FADDQ13158 208 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PMS2P3Q13401 168 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 TMED1Q13445 227 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 TP53BP2Q13625 1128 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 EFR3AQ14156 821 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SELPLGQ14242 412 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CAPRIN1Q14444 709 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 LASP1Q14847 261 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 IGFBP7Q16270 282 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RGS21Q2M5E4 152 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RABL3Q5HYI8 236 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PRAMEF20Q5VT98 475 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 FNDC7Q5VTL7 733 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF691Q5VV52 312 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SAXO2Q658L1 398 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GTF2IRD2BQ6EKJ0 949 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 C16orf87Q6PH81 154 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SHQ1Q6PI26 577 aaKnown RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 BHLHB9Q6PI77 547 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GFRALQ6UXV0 394 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 APOOLQ6UXV4 268 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 MAMDC2Q7Z304 686 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 NUP54Q7Z3B4 507 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 C6orf120Q7Z4R8 191 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GALNTL5Q7Z4T8 443 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 GTF2IRD2Q86UP8 949 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 EPHX4Q8IUS5 362 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 LACC1Q8IV20 430 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SIAH3Q8IW03 269 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SULF2Q8IWU5 870 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 PM20D2Q8IYS1 436 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 FAM109AQ8N4B1 249 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF808Q8N4W9 903 aaPredicted RBP4.79□□□□□ -1.64
SHMT1-211ENST00000618902 OR5D16Q8NGK9 328 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 OR5M3Q8NGP4 307 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 FAM110BQ8TC76 370 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 SPPL2AQ8TCT8 520 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 CHPT1Q8WUD6 406 aa4.79□□□□□ -1.64
SHMT1-211ENST00000618902 RORBQ92753 470 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms