RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 RHEBL1Q8TAI7 183 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 KLK4Q9Y5K2 254 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 OR51F1A6NGY5 319 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 TAAR5O14804 337 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 CCR6P51684 374 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 Q1RN00 199 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 RPS27LQ71UM5 84 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM234Q8WY98 164 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 CPNE4Q96A23 557 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SORCS2Q96PQ0 1159 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 DPEP3Q9H4B8 488 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 POPDC3Q9HBV1 291 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 HMX1Q9NP08 348 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 ZDHHC3Q9NYG2 299 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 CHD3Q12873 2000 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 FAM166BA8MTA8 275 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 GRXCR1A8MXD5 290 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 NME4O00746 187 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SORBS2O94875 1100 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 C21orf33P30042 268 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 CCR7P32248 378 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 UBE2IP63279 158 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 GRB7Q14451 532 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PRAMEF18Q5VWM3 479 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 LINGO4Q6UY18 593 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SLC35F2Q8IXU6 374 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PLD6Q8N2A8 252 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 TCTEX1D1Q8N7M0 179 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 KDF1Q8NAX2 398 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 ANKRD9Q96BM1 317 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 FTHL17Q9BXU8 183 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 MIOXQ9UGB7 285 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 BACE2Q9Y5Z0 518 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PDHXO00330 501 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 POP4O95707 220 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 DCTP40126 519 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 C3orf38Q5JPI3 329 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SIRPB2Q5JXA9 342 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 OR51L1Q8NGJ5 315 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 UBQLN3Q9H347 655 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 LY86O95711 162 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 MPIG6BO95866 241 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 AKR1A1P14550 325 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 PFKLP17858 780 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SELENOVP59797 346 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SLC7A9P82251 487 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SMAD3P84022 425 aaKnown RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 MAT1AQ00266 395 aaKnown RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 CRHR2Q13324 411 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 HBMQ6B0K9 141 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM225Q6GV28 225 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ACTL8Q9H568 366 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TACR3P29371 465 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ETFDHQ16134 617 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 GRIK5Q16478 980 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 NXPE4Q6UWF7 544 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 KIAA0319LQ8IZA0 1049 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 BPIFCQ8NFQ6 507 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D20Q96BZ9 403 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ACSS1Q9NUB1 689 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 KLRF1Q9NZS2 232 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3DA0A087WVF3 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3IA0A087WXS9 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3EA0A087X179 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3KA0A087X1G2 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 A0A1B0GV72 72 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3FA6NER0 549 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3LB9A6J9 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3HP0C7X1 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3GQ6DHY5 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3CQ6IPX1 549 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ACOT7LQ6ZUV0 252 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 VRK3Q8IV63 474 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TBC1D3Q8IZP1 549 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TEPSINQ96N21 525 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 RANBP9Q96S59 729 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 RAB18Q9NP72 206 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SCML1Q9UN30 329 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 CEBPZOSA8MTT3 80 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 DVL1O14640 695 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 DVL1P1P54792 670 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 FABP9Q0Z7S8 132 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 OR9Q2Q8NGE9 314 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 TK1P04183 234 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 C4orf36Q96KX1 117 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SLC6A20Q9NP91 592 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF43P17038 809 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ANXA7P20073 488 aaKnown RBP14.16□□□□□ -0.14
COL5A1-208ENST00000618395 HTR3AP46098 478 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ECH1Q13011 328 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 KCNC3Q14003 757 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SLC25A18Q9H1K4 315 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 ADAM29Q9UKF5 820 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 SPO11Q9Y5K1 396 aa14.16□□□□□ -0.14
COL5A1-208ENST00000618395 STBD1O95210 358 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 ECI1P42126 302 aa14.15□□□□□ -0.14
COL5A1-208ENST00000618395 SNRPEP62304 92 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms