RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TRAM2Q15035 370 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 OR1Q1Q15612 314 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 HYAL4Q2M3T9 481 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 TMEM44Q2T9K0 475 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 PRAMEF20Q5VT98 475 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 TIGD3Q6B0B8 471 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 WBP2NLQ6ICG8 309 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 ULK3Q6PHR2 472 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 LINC00696Q6ZRV3 163 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 PLEKHM3Q6ZWE6 761 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 GDF7Q7Z4P5 450 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 TMEM179BQ7Z7N9 219 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 PLCZ1Q86YW0 608 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 OR2M3Q8NG83 312 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 OR5K1Q8NHB7 308 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 DNAJA4Q8WW22 397 aaPredicted RBP6.8□□□□□ -1.32
VPS45-213ENST00000618148 SLC38A4Q969I6 547 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 C3orf49Q96BT1 292 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 C1GALT1C1Q96EU7 318 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 SLC41A3Q96GZ6 507 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 MPP4Q96JB8 637 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 SIGLEC12Q96PQ1 595 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 UBQLN3Q9H347 655 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 DEPPQ9NTK1 212 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 ANKRD10Q9NXR5 420 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 PPP4R1LQ9P1A2 415 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 OAZ3Q9UMX2 235 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 NTNG1Q9Y2I2 539 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 SAMHD1Q9Y3Z3 626 aaKnown RBP6.8□□□□□ -1.32
VPS45-213ENST00000618148 TESMINQ9Y4I5 508 aa6.8□□□□□ -1.32
VPS45-213ENST00000618148 A0A087WZY1 265 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 TRBV4-1A0A0J9YWV2 114 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SH3PXD2BA1X283 911 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 A6NL46 340 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 CPSF4LA6NMK7 179 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 TNFRSF11BO00300 401 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 GADD45GO95257 159 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 RASAL1O95294 804 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 P04436 131 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SP1P08047 785 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 ZNF26P17031 533 aaPredicted RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 PRKCAP17252 672 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 CNR1P21554 472 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 PEX2P28328 305 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 IFNA8P32881 189 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 RBM34P42696 430 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 YAP1P46937 504 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 PTDSS1P48651 473 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 ST13P50502 369 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 IST1P53990 364 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 CDH12P55289 794 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 TAS2R41P59536 307 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 PPP2R2BQ00005 443 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SPIBQ01892 262 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 OC90Q02509 493 aaPredicted RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 RAPSNQ13702 412 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 GANABQ14697 944 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 TRIP10Q15642 601 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SNCBQ16143 134 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 PLPPR5Q32ZL2 321 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SPINK14Q6IE38 97 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SLC25A25Q6KCM7 469 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 PPP4R4Q6NUP7 873 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 FAHD1Q6P587 224 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 BORAQ6PGQ7 559 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 WDR88Q6ZMY6 472 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 ATG4DQ86TL0 474 aaPredicted RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 HIPK1Q86Z02 1210 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 ZDHHC13Q8IUH4 622 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 LINC00471Q8N535 108 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 PACRGLQ8N7B6 248 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 OR2M7Q8NG81 312 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 ACOT11Q8WXI4 607 aaPredicted RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 ZCCHC14Q8WYQ9 949 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 SH3YL1Q96HL8 342 aaPredicted RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 ZNF597Q96LX8 424 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 FAM173AQ9BQD7 235 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 C9orf16Q9BUW7 83 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 FNDC11Q9BVV2 318 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 SEMA6AQ9H2E6 1030 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 TMEM27Q9HBJ8 222 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 TAS2R10Q9NYW0 307 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 PLA2G3Q9NZ20 509 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 USE1Q9NZ43 259 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 KLF13Q9Y2Y9 288 aaPredicted RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 MRPS18CQ9Y3D5 142 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 ZZEF1O43149 2961 aa6.79□□□□□ -1.32
VPS45-213ENST00000618148 TPRP12270 2363 aaKnown RBP6.79□□□□□ -1.32
VPS45-213ENST00000618148 PKD1L2Q7Z442 2459 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 A0A087WUJ7 227 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 A0A087WUU8 490 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 HTR3EA5X5Y0 456 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 H0YJX3 145 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 KLF4O43474 513 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 FZD7O75084 574 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 NPIPB7O75200 414 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 CBR3O75828 277 aa6.78□□□□□ -1.32
VPS45-213ENST00000618148 GLSO94925 669 aaPredicted RBP6.78□□□□□ -1.32
VPS45-213ENST00000618148 HPRP00739 348 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms