RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 C4orf47A7E2U8 309 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 M0R082 166 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 HCRTR2O43614 444 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SCGB1D2O95969 90 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 GYPBP06028 91 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ANKRD34CP0C6C1 535 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CLUP10909 449 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 JUNBP17275 347 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 MST1P26927 711 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 DCKP27707 260 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 IL12BP29460 328 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ETV5P41161 510 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 GPR143P51810 404 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SMSP52788 366 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 FBXW4P57775 412 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 PLCXD2Q0VAA5 305 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SLC16A12Q6ZSM3 486 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 RABEPKQ7Z6M1 372 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SLC34A3Q8N130 599 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 OMA1Q96E52 524 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF582Q96NG8 517 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 SPSB2Q99619 263 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 NPAS1Q99742 590 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 GALNT9Q9HCQ5 603 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 UBQLN4Q9NRR5 601 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 RPS6KB2Q9UBS0 482 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 OTOGLQ3ZCN5 2332 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 NTN3O00634 580 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 CDX4O14627 284 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 KLF4O43474 513 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CDC40O60508 579 aaKnown RBP eCLIP7.14□□□□□ -1.27
NEK3-207ENST00000617054 FPR3P25089 353 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 GRK5P34947 590 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 IFNGR2P38484 337 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 RPS3AP61247 264 aaKnown RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 NCS1P62166 190 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 RPS18P62269 152 aaKnown RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 RNF4P78317 190 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF91Q05481 1191 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 INPP5JQ15735 1006 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF385CQ66K41 422 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 PAPD4Q6PIY7 484 aaKnown RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 BRICD5Q6PL45 260 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 CD300LDQ6UXZ3 194 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF620Q6ZNG0 422 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 RASSF6Q6ZTQ3 369 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 SLC29A4Q7RTT9 530 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 OVCH1Q7RTY7 1134 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 GALNT6Q8NCL4 622 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 OR7G1Q8NGA0 311 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 OR8J1Q8NGP2 316 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 WDR36Q8NI36 951 aaKnown RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 NDNFQ8TB73 568 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 METTL21AQ8WXB1 218 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 MR1Q95460 341 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF578Q96N58 590 aaPredicted RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 SIGLEC11Q96RL6 698 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 ZNF559Q9BR84 538 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 UBQLN3Q9H347 655 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 IL20Q9NYY1 176 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 TESQ9UGI8 421 aaKnown RBP7.14□□□□□ -1.27
NEK3-207ENST00000617054 MED31Q9Y3C7 131 aa7.14□□□□□ -1.27
NEK3-207ENST00000617054 UNC119BA6NIH7 251 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 SOCS6O14544 535 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 IL33O95760 270 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ADORA3P0DMS8 318 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 DBTP11182 482 aaKnown RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 CD36P16671 472 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 TBXA2RP21731 343 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 SLC16A1P53985 500 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 SPEM2Q0P670 501 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 LSAMPQ13449 338 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 OAFQ86UD1 273 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 BMPERQ8N8U9 685 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 OR4F15Q8NGB8 312 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 OR51L1Q8NGJ5 315 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ZNF563Q8TA94 476 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 FANK1Q8TC84 345 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 DUSP19Q8WTR2 217 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 MYDGFQ969H8 173 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 IFT27Q9BW83 186 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 SLC25A19Q9HC21 320 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ENOPH1Q9UHY7 261 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ZNF292O60281 2723 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 TRBV11-1A0A0K0K1C0 115 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 FRG2CA6NGY1 282 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 B4DXG7 233 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 CHP2O43745 196 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 SOX30O94993 753 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 UBL4AP11441 157 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 GSTM3P21266 225 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 CD79BP40259 229 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 SOX3P41225 446 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 GRK6P43250 576 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 COPZ1P61923 177 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 EFNB1P98172 346 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ZNF117Q03924 483 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 ZFP36L1Q07352 338 aaKnown RBP7.13□□□□□ -1.27
NEK3-207ENST00000617054 CTF1Q16619 201 aa7.13□□□□□ -1.27
NEK3-207ENST00000617054 TIGD6Q17RP2 521 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms