RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 FAM24BQ8N5W8 94 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GHSRQ92847 366 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 RNGTTO60942 597 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 CLUP10909 449 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ELAVL4P26378 380 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 SERPINA4P29622 427 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 TGM3Q08188 693 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 GAB1Q13480 694 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 POM121L1PQ3SYA9 428 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 PABPC1L2AQ5JQF8 200 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 TANGO2Q6ICL3 276 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 RPTNQ6XPR3 784 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF705AQ6ZN79 300 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 C6orf120Q7Z4R8 191 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 SKA3Q8IX90 412 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 FOXRED1Q96CU9 486 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 EDEM2Q9BV94 578 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 MRIQ9BWK5 157 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ESRP2Q9H6T0 727 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ABCD4O14678 606 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 PGAM2P15259 253 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 NDUFV2P19404 249 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 PRSS3P35030 304 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ARMC6Q6NXE6 501 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 TMEM205Q6UW68 189 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 HGDQ93099 445 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 UBE2E3Q969T4 207 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF354BQ96LW1 612 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 MCHR1Q99705 422 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 OSER1Q9NX31 292 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 TAS2R8Q9NYW2 309 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZFP37Q9Y6Q3 630 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ACOD1A6NK06 481 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 RECKO95980 971 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 EPHA4P54764 986 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 YOD1Q5VVQ6 348 aaPredicted RBP12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 USP53Q70EK8 1073 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 NLGN2Q8NFZ4 835 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 SLC7A13Q8TCU3 470 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 RGMAQ96B86 450 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 LMF1Q96S06 567 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 C1GALT1Q9NS00 363 aa12.68□□□□□ -0.38
PPP4R3B-205ENST00000616288 hCG_1809904A0A1W2PP81 198 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 A0A1W2PR64 198 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 A0A1W2PRV1 198 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 ADAM10O14672 748 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 TAF10Q12962 218 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 SERINC3Q13530 473 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 CTSL3PQ5NE16 218 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 RTP3Q9BQQ7 232 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 PCDH8O95206 1070 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 DBIP07108 87 aaKnown RBP12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 FGF2P09038 288 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 DAOP14920 347 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 AGTRAPQ6RW13 159 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 CA10Q9NS85 328 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 CKLFQ9UBR5 152 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 LRP5O75197 1615 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 MTMR11A4FU01 709 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR5H14A6NHG9 310 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 GLOD5A6NK44 160 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 WNT10BO00744 389 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 CA12O43570 354 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 KLK3P07288 261 aaPredicted RBP12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 F3P13726 295 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF25P17030 456 aaPredicted RBP12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 UQCRC2P22695 453 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 CCR4P51679 360 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 IL13RA1P78552 427 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 C4orf17Q53FE4 359 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 CD163Q86VB7 1156 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 NUDT13Q86X67 352 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR51S1Q8NGJ8 323 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZDHHC6Q9H6R6 413 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 ELOVL2Q9NXB9 296 aa12.67□□□□□ -0.38
PPP4R3B-205ENST00000616288 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 FZD6O60353 706 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 ALDH3B1P43353 468 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 XCR1P46094 333 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 EIF2B1Q14232 305 aaKnown RBP12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 RAB41Q5JT25 222 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 TRIM46Q7Z4K8 759 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 TERB2Q8NHR7 220 aa12.66□□□□□ -0.38
PPP4R3B-205ENST00000616288 NUBPLQ8TB37 319 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms