RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ZFAND1Q8TCF1 268 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 PINX1Q96BK5 328 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ZNF576Q9H609 170 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 KCNJ16Q9NPI9 418 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 PRAMEF27A3QJZ7 478 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 NFKBIEO00221 500 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 MSTNO14793 375 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 PRAMEF9Q5VWM5 478 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 UNC50Q53HI1 259 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 TMEM184AQ6ZMB5 413 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 FAM57BQ71RH2 274 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ZNF781Q8N8C0 355 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ASIC5Q9NY37 505 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 EME2A4GXA9 379 aaPredicted RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 TOXO94900 526 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 EIF2DP41214 584 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 MAGEB1P43366 347 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 SNRPD2P62316 118 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 F2RL3Q96RI0 385 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 AUP1Q9Y679 476 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 LRRC3CA6NJW4 275 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 GPR39O43194 453 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 H2AFB2P0C5Z0 115 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 CD1BP29016 333 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 STT3AP46977 705 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 CSNK1EP49674 416 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 RPS16P62249 146 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 UPP1Q16831 310 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 CATSPERDQ86XM0 798 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 KLHDC8AQ8IYD2 350 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 IL17FQ96PD4 163 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 KCNJ15Q99712 375 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 DEFB127Q9H1M4 99 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 SYNPO2LQ9H987 977 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 S100A14Q9HCY8 104 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 ISYNA1Q9NPH2 558 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 HEBP1Q9NRV9 189 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 RABL2AQ9UBK7 228 aaPredicted RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 RPL26L1Q9UNX3 145 aaKnown RBP11.89□□□□□ -0.51
TCF4-248ENST00000616053 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
TCF4-248ENST00000616053 A0A1B0GTW7 788 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 DRGXA6NNA5 263 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 J3KR12 359 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 SHBGP04278 402 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 DCNP07585 359 aaKnown RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 ELAVL4P26378 380 aaKnown RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 TBPL1P62380 186 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 OR8G1Q15617 311 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 RAB2BQ8WUD1 216 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 SCAMP4Q969E2 229 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 CD244Q9BZW8 370 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 ROBO3Q96MS0 1386 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 ASTN1O14525 1302 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 TRAV18A0A075B6X5 111 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 A0A0A6YYC8 382 aaPredicted RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 I3L1I5 382 aaPredicted RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 SLC22A1O15245 554 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 ADAM20O43506 726 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 PEX10O60683 326 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 CLDN17P56750 224 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 EXOSC2Q13868 293 aaKnown RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 SGPP1Q9BX95 441 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 GSRP00390 522 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 PENKP01210 267 aaPredicted RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 PHYHD1Q5SRE7 291 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 MAFAQ8NHW3 353 aaPredicted RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 CXorf21Q9HAI6 301 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 PATZ1Q9HBE1 687 aaKnown RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 SLC5A10A0PJK1 596 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 FAM166BA8MTA8 275 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 SIAH2O43255 324 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 TIMP1P01033 207 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 SLC19A1P41440 591 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 CLDN2P57739 230 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 C10orf62Q5T681 223 aaPredicted RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 ACOT8O14734 319 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 PPIHO43447 177 aaKnown RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 NSA2O95478 260 aaKnown RBP11.88□□□□□ -0.51
TCF4-248ENST00000616053 AHRP35869 848 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 RAB41Q5JT25 222 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 TUBA3EQ6PEY2 450 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 BAGE2Q86Y30 109 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 HYLS1Q96M11 299 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 PIGQQ9BRB3 760 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 RPS10P5Q9NQ39 176 aa11.88□□□□□ -0.51
TCF4-248ENST00000616053 ENTPD2Q9Y5L3 495 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms