RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 IL33O95760 270 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 MT-ND4P03905 459 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ITGA3P26006 1051 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 MAGEA8P43361 318 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 RUNX2Q13950 521 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 EEF1A1P5Q5VTE0 462 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 GPALPP1Q8IXQ4 340 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 LINC00615Q96LM1 132 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 NMNAT3Q96T66 252 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 NDRG4Q9ULP0 352 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 AREL1O15033 823 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 P2RX6O15547 441 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 MLLT11Q13015 90 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 NKAPLQ5M9Q1 402 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF793Q6ZN11 406 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF440Q8IYI8 595 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 CA13Q8N1Q1 262 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 FAM174AQ8TBP5 190 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM234Q8WY98 164 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 HLA-CQ95604 372 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 GABARAPL3Q9BY60 117 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 FOXQ1Q9C009 403 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 PTGES2Q9H7Z7 377 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 SATB2Q9UPW6 733 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 PLEKHA6Q9Y2H5 1048 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ISPDA4D126 451 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 SCGB1D2O95969 90 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 SNU13P55769 128 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 PSMA6P60900 246 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ACSM5Q6NUN0 579 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC46A3Q7Z3Q1 461 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 DRAXINQ8NBI3 349 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 OR2A1Q8NGT9 310 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 TXNL4BQ9NX01 149 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 PAQR5Q9NXK6 330 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 BAIAP2Q9UQB8 552 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF337Q9Y3M9 751 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 DICER1Q9UPY3 1922 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 CEP350Q5VT06 3117 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 EFCAB7A8K855 629 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 UTS2O95399 124 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 LGI1O95970 557 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 MELKQ14680 651 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 AGERQ15109 404 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 XKRXQ6PP77 449 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 RASSF6Q6ZTQ3 369 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ADGRF3Q8IZF5 1079 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC7A13Q8TCU3 470 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 NPRL2Q8WTW4 380 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 ZFPM2Q8WW38 1151 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 BCL7BQ9BQE9 202 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 PELOQ9BRX2 385 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 TAS2R10Q9NYW0 307 aa8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 RBM7Q9Y580 266 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-222ENST00000615540 POLR1CO15160 346 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 S1PR1P21453 382 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 DRD5P21918 477 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TGFBR2P37173 567 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 AQP2P41181 271 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 RIDAP52758 137 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PRPS1P60891 318 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 ILKQ13418 452 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC25A24Q6NUK1 477 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 KLHDC8BQ8IXV7 354 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 RHOXF1Q8NHV9 184 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CNOT9Q92600 299 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 LDAHQ9H6V9 325 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TRPV4Q9HBA0 871 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 WASH6PQ9NQA3 447 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 C1GALT1Q9NS00 363 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 ABI3Q9P2A4 366 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 UPB1Q9UBR1 384 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TESQ9UGI8 421 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEFF2Q9UIK5 374 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 RASD1Q9Y272 281 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 OR5K3A6NET4 321 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 ZNF878C9JN71 531 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 G3V3Y1 287 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 FMO6PO60774 539 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CPNE6O95741 557 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 F10P00742 488 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 YES1P07947 543 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 ST6GAL1P15907 406 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC2A5P22732 501 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 FOXK2Q01167 660 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 NTRK2Q16620 822 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 PRAMEF17Q5VTA0 474 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 VASNQ6EMK4 673 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC18B1Q6NT16 456 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 C8orf82Q6P1X6 216 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 RBM12BQ8IXT5 1001 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 CELF2-AS1Q8N7Q2 184 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 SYNPRQ8TBG9 265 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 HOXD1Q9GZZ0 328 aa8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 WSB2Q9NYS7 404 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 YARS2Q9Y2Z4 477 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-222ENST00000615540 C13orf42A0A1B0GVH6 325 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms