RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 FMO6PO60774 539 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TRIM3O75382 744 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 DEAF1O75398 565 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 FCGR1AP12314 374 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 GNLYP22749 145 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ELAVL4P26378 380 aaKnown RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 UQCRFS1P47985 274 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 P2RX1P51575 399 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 CCR4P51679 360 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 CDH12P55289 794 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 GPR85P60893 370 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SLC34A1Q06495 639 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 FOXO1Q12778 655 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SEC23BQ15437 767 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TRIP10Q15642 601 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 EXOC3L2Q2M3D2 409 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 OGFRL1Q5TC84 451 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SPINK14Q6IE38 97 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SLC30A6Q6NXT4 461 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ARSKQ6UWY0 536 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 Q6ZS92 163 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF550Q7Z398 422 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 GDF7Q7Z4P5 450 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 GPALPP1Q8IXQ4 340 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF440Q8IYI8 595 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ICA1LQ8NDH6 482 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 B4GALNT2Q8NHY0 566 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 GPR119Q8TDV5 335 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ADAMTS16Q8TE57 1224 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SLC35B4Q969S0 331 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 C3orf49Q96BT1 292 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SNRNP40Q96DI7 357 aaKnown RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SLC41A3Q96GZ6 507 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 CENPNQ96H22 339 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TMEM41AQ96HV5 264 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SGCZQ96LD1 299 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SLC29A1Q99808 456 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 PRSS27Q9BQR3 290 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF559Q9BR84 538 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 UTP23Q9BRU9 249 aaKnown RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 RNF32Q9H0A6 362 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 DSN1Q9H410 356 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 NMNAT1Q9HAN9 279 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SACM1LQ9NTJ5 587 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 RYDENQ9NUL5 291 aaKnown RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TUBA8Q9NY65 449 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 C6orf203Q9P0P8 240 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 ABI3Q9P2A4 366 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TEKT2Q9UIF3 430 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 OAZ3Q9UMX2 235 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SAMHD1Q9Y3Z3 626 aaKnown RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SHANK1Q9Y566 2161 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TRAPPC13A5PLN9 417 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 ANKRD33BA6NCL7 494 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 ANKUB1A6NFN9 424 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 H3BNH8 94 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TNFRSF11BO00300 401 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 FAAHO00519 579 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 SOCS2O14508 198 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 PIP5K1CO60331 668 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 SLC25A12O75746 678 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 OR5F1O95221 314 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 GADD45GO95257 159 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 P04436 131 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 H1F0P07305 194 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 LINGO3P0C6S8 592 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 ITGA2P17301 1181 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 HOXB6P17509 224 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 FPR1P21462 350 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CNR1P21554 472 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 PRKACGP22612 351 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TCEA1P23193 301 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 RFC3P40938 356 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 IDH2P48735 452 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CLK3P49761 638 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 HMGA2P52926 109 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 UGT2B15P54855 530 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TAS2R41P59536 307 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 C17orf67Q0P5P2 114 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 SNTA1Q13424 505 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 QPRTQ15274 297 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 ZSWIM7Q19AV6 140 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 LRRC36Q1X8D7 754 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 RANBP3LQ86VV4 465 aaPredicted RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CYP4Z1Q86W10 505 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 MEX3DQ86XN8 651 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 PLCZ1Q86YW0 608 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 MISPQ8IVT2 679 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CADM2Q8N3J6 435 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CISD2Q8N5K1 135 aaKnown RBP7.29□□□□□ -1.24
PCDH9-205ENST00000614931 LSMEM1Q8N8F7 131 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TOR1AIP2Q8NFQ8 470 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 OR9Q2Q8NGE9 314 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 OR52J3Q8NH60 311 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 OR5W2Q8NH69 310 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 OR5K1Q8NHB7 308 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 POC1BQ8TC44 478 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 SLC7A13Q8TCU3 470 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 HAS2Q92819 552 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 SCMH1Q96GD3 660 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms