RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CPSF4LA6NMK7 179 aaKnown RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 H0YJX3 145 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 GTPBP1O00178 669 aaKnown RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 TNFRSF11BO00300 401 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 OIP5O43482 229 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 SCO2O43819 266 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ADAM11O75078 769 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 GADD45GO95257 159 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 RASAL1O95294 804 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 HPRP00739 348 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 GKN3PP0CG01 181 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 PRG2P13727 222 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 UQCRBP14927 111 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ELAVL4P26378 380 aaKnown RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 PTGDSP41222 190 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 YAP1P46937 504 aaKnown RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 RNF144AP50876 292 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ARHGDIAP52565 204 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 IST1P53990 364 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 CDH12P55289 794 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 TAS2R41P59536 307 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF117Q03924 483 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 C17orf67Q0P5P2 114 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ST3GAL3Q11203 375 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 PIN1Q13526 163 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 GANABQ14697 944 aaKnown RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 INPP5JQ15735 1006 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ABHD17BQ5VST6 288 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 B3GNTL1Q67FW5 361 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-212ENST00000613856 PPP4R4Q6NUP7 873 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 SLC30A6Q6NXT4 461 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 TMEM179BQ7Z7N9 219 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 MARCH3Q86UD3 253 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 BEST3Q8N1M1 668 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 GATSQ8NAP1 163 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ADAMTS16Q8TE57 1224 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 SDCCAG3Q96C92 435 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ARSGQ96EG1 525 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 FRMD6Q96NE9 622 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 CIB1Q99828 191 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 FNDC11Q9BVV2 318 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 OSBPL11Q9BXB4 747 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 VCXQ9H320 206 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 METTL7AQ9H8H3 244 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 USE1Q9NZ43 259 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 CNIH4Q9P003 139 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 ICAM5Q9UMF0 924 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 WIF1Q9Y5W5 379 aa10.42□□□□□ -0.74
SLIRP-212ENST00000613856 PCNX3Q9H6A9 2034 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 A0A0B4J2E0 115 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 A0A1B0GX12 115 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 G3V2T6 193 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 ZNF26P17031 533 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-212ENST00000613856 MSX1P28360 303 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 GRNP28799 593 aaKnown RBP10.41□□□□□ -0.74
SLIRP-212ENST00000613856 CASP3P42574 277 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 P2RX1P51575 399 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 PPP2R2BQ00005 443 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 HOXC5Q00444 222 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 DAG1Q14118 895 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 TRAM2Q15035 370 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 OR1Q1Q15612 314 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 EXOC3L2Q2M3D2 409 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 NDUFAF6Q330K2 333 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 CBLN3Q6UW01 205 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 IL20RBQ6UXL0 311 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 ZBTB49Q6ZSB9 765 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 APLFQ8IW19 511 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-212ENST00000613856 CYP4Z2PQ8N1L4 340 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 CBR4Q8N4T8 237 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 LINC00471Q8N535 108 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 TMCO5AQ8N6Q1 288 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 OR5M3Q8NGP4 307 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 OR5W2Q8NH69 310 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 B4GALNT2Q8NHY0 566 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 SLC41A3Q96GZ6 507 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 ANGPTL4Q9BY76 406 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 RNF32Q9H0A6 362 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 ING2Q9H160 280 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 COQ10BQ9H8M1 238 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 TMEM27Q9HBJ8 222 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 SDHAF3Q9NRP4 125 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 KLRF1Q9NZS2 232 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 CARD8Q9Y2G2 431 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 U3KQV3 271 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 F8P00451 2351 aa10.41□□□□□ -0.74
SLIRP-212ENST00000613856 PDZD2O15018 2839 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 CNTRLQ7Z7A1 2325 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 MPDZO75970 2070 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 TRBV4-1A0A0J9YWV2 114 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 A0A1B0GWA3 101 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 ANKUB1A6NFN9 424 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 PDLIM1O00151 329 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 SOCS2O14508 198 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 EI24O14681 340 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 HCRTR2O43614 444 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 CHP2O43745 196 aa10.4□□□□□ -0.74
SLIRP-212ENST00000613856 CYP7B1O75881 506 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms