RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 CDS1Q92903 461 aa15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 CCDC126Q96EE4 140 aa15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 METTL2AQ96IZ6 378 aaKnown RBP15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 STACQ99469 402 aa15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 DUSP22Q9NRW4 184 aa15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 ACSS1Q9NUB1 689 aaPredicted RBP15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 ZDHHC18Q9NUE0 388 aa15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 ING1Q9UK53 422 aaPredicted RBP15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 FAF1Q9UNN5 650 aaPredicted RBP15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 SLC25A15Q9Y619 301 aa15.26■□□□□ 0.03
CHMP4A-211ENST00000609024 A0A087WUV0 522 aaPredicted RBP15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 NPIPA5A0A0B4J1W7 369 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 EXOC1LA0A1B0GW35 172 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 NPIPA7E9PJI5 369 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 ZNF264O43296 627 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 CYP7B1O75881 506 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 NPIPA8P0DM63 369 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 TFPIP10646 304 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 CASQ1P31415 396 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 NAA20P61599 178 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 SNRPD2P62316 118 aaKnown RBP15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 PHC1P78364 1004 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 LASP1Q14847 261 aaKnown RBP15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 QPRTQ15274 297 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 KLHL26Q53HC5 615 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 UBAP2Q5T6F2 1119 aaKnown RBP15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 CDC73Q6P1J9 531 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 B3GLCTQ6Y288 498 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 RELL1Q8IUW5 271 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 OR5W2Q8NH69 310 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 FBXO17Q96EF6 278 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 VRK1Q99986 396 aaPredicted RBP15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 PIGUQ9H490 435 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 GSTO2Q9H4Y5 243 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 MYOZ1Q9NP98 299 aaPredicted RBP15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 DTNAQ9Y4J8 743 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 TRAF6Q9Y4K3 522 aa15.25■□□□□ 0.03
CHMP4A-211ENST00000609024 LOC390937A0A1W2PQ73 354 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 SLC28A1O00337 649 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 GPR171O14626 319 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 OIP5O43482 229 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 SPRY1O43609 319 aaPredicted RBP15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 EIF4E2O60573 245 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 MRPL33O75394 65 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 HMGN2P05204 90 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 KRT16P08779 473 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 UBL4AP11441 157 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 EDNRAP25101 427 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 DIO1P49895 249 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 ATP12AP54707 1039 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 CR1LQ2VPA4 569 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 NDUFAF6Q330K2 333 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 SPDYE7PQ495Y7 208 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 TIGD2Q4W5G0 525 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 KLHL24Q6TFL4 600 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 SLC46A3Q7Z3Q1 461 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 TMEM234Q8WY98 164 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 ZNF764Q96H86 408 aaPredicted RBP15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 TSSK3Q96PN8 268 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 KCNS3Q9BQ31 491 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 PRR14Q9BWN1 585 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 C1orf109Q9NX04 203 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 UPB1Q9UBR1 384 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 AMDHD2Q9Y303 409 aa15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 SPIN1Q9Y657 262 aaPredicted RBP15.24■□□□□ 0.03
CHMP4A-211ENST00000609024 WIPF1O43516 503 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 TBX19O60806 448 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 UROSP10746 265 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 MYL2P10916 166 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 TGFBR3Q03167 851 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 TP53BP2Q13625 1128 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 SLC25A53Q5H9E4 307 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 DCST2Q5T1A1 773 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 TMPPEQ6ZT21 453 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 R3HCC1LQ7Z5L2 792 aaKnown RBP15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 SLC25A43Q8WUT9 341 aaPredicted RBP15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 ZNF75CPQ92670 426 aaPredicted RBP15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 FAM120BQ96EK7 910 aaKnown RBP15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 FOXN4Q96NZ1 517 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 CCT7Q99832 543 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 PLA2G12AQ9BZM1 189 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 ADAM19Q9H013 955 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 ANKZF1Q9H8Y5 726 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 MALRD1Q5VYJ5 2156 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 PLCE1Q9P212 2302 aa15.23■□□□□ 0.03
CHMP4A-211ENST00000609024 VWC2LB2RUY7 222 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 EFNA1P20827 205 aaPredicted RBP15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 CKAP4Q07065 602 aaKnown RBP15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 MERTKQ12866 999 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 PDK3Q15120 406 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 GABRA6Q16445 453 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 ZNF385BQ569K4 471 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 CLHC1Q8NHS4 586 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 PIGXQ8TBF5 258 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 IFT81Q8WYA0 676 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 ST8SIA1Q92185 356 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 MUS81Q96NY9 551 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 FMO2Q99518 471 aa15.22■□□□□ 0.03
CHMP4A-211ENST00000609024 THUMPD3Q9BV44 507 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms