RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 SLC30A8Q8IWU4 369 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 C9orf106Q8NAJ2 232 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 PCYOX1LQ8NBM8 494 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 NAXEQ8NCW5 288 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 SMPDL3BQ92485 455 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 DOCK7Q96N67 2140 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 SPATA9Q9BWV2 254 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 PINK1Q9BXM7 581 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 EVA1AQ9H8M9 152 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 RNF122Q9H9V4 155 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 GLRX2Q9NS18 164 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 DNAJB12Q9NXW2 375 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 MCTS1Q9ULC4 181 aaKnown RBP12.84□□□□□ -0.35
HDDC2-206ENST00000608461 CAPN7Q9Y6W3 813 aa12.84□□□□□ -0.35
HDDC2-206ENST00000608461 HCFC1P51610 2035 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CFAP73A6NFT4 308 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 TGM6O95932 706 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 COX6B1P14854 86 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CD1EP15812 388 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 IGFBP2P18065 325 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 BMP5P22003 454 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 SLC6A2P23975 617 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 EIF1AXP47813 144 aaKnown RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 PCYT1AP49585 367 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CARD18P57730 90 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CDK6Q00534 326 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 PON3Q15166 354 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 SERPINA11Q86U17 422 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 OR10D3Q8NH80 312 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 RP9Q8TA86 221 aaKnown RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CNOT9Q92600 299 aaKnown RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF607Q96SK3 696 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 NPAS1Q99742 590 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 UCK2Q9BZX2 261 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 GID8Q9NWU2 228 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 JKAMPQ9P055 326 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF443Q9Y2A4 671 aaPredicted RBP12.83□□□□□ -0.36
HDDC2-206ENST00000608461 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 CELSR2Q9HCU4 2923 aa12.83□□□□□ -0.36
HDDC2-206ENST00000608461 A0A0J9YW62 118 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 CLDN24A6NM45 220 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 FAM90A27PA6NNH2 459 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 H0YC42 278 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 FBP2O00757 339 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 EFNA2O43921 213 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 SERPINB7O75635 380 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 SYNGR4O95473 234 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 NUDT7P0C024 238 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 COL8A1P27658 744 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 PRKAR1BP31321 381 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 LSP1P33241 339 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 SLC1A3P43003 542 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 RNF144AP50876 292 aaPredicted RBP12.82□□□□□ -0.36
HDDC2-206ENST00000608461 TPD52P55327 224 aaPredicted RBP12.82□□□□□ -0.36
HDDC2-206ENST00000608461 MERTKQ12866 999 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 EPS8Q12929 822 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF311Q5JNZ3 666 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 PLEKHM3Q6ZWE6 761 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 CPLX4Q7Z7G2 160 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 C11orf65Q8NCR3 313 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 HIPK4Q8NE63 616 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 OR8J3Q8NGG0 315 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 FNDC9Q8TBE3 224 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 OSTF1Q92882 214 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 MAL2Q969L2 176 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 INTS12Q96CB8 462 aaKnown RBP12.82□□□□□ -0.36
HDDC2-206ENST00000608461 LRRC58Q96CX6 371 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 REXO5Q96IC2 774 aaKnown RBP12.82□□□□□ -0.36
HDDC2-206ENST00000608461 CCDC106Q9BWC9 280 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 PRRG4Q9BZD6 226 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 IKZF5Q9H5V7 419 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 KAT8Q9H7Z6 458 aaKnown RBP12.82□□□□□ -0.36
HDDC2-206ENST00000608461 GP6Q9HCN6 339 aa12.82□□□□□ -0.36
HDDC2-206ENST00000608461 UNC79Q9P2D8 2635 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 TNFSF11O14788 317 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 SLC7A1P30825 629 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 RYKP34925 604 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 SFTPDP35247 375 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 IDH2P48735 452 aaKnown RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 RAC3P60763 192 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 COPZ1P61923 177 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 PLAURQ03405 335 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 SCARB2Q14108 478 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms