RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 ZNF264O43296 627 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 IGHV4-31P0DP07 118 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 UBL4AP11441 157 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 NEFHP12036 1026 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 ZNF16P17020 682 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-203ENST00000608284 CR1P17927 2039 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 COX5AP20674 150 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 PRPH2P23942 346 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 HPCAL1P37235 193 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 PDLIM4P50479 330 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 KIAA0040Q15053 153 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 QPRTQ15274 297 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 C11orf71Q6IPW1 123 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 CDC73Q6P1J9 531 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 SEZ6L2Q6UXD5 910 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 ZYG11AQ6WRX3 759 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 FRMD7Q6ZUT3 714 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 ALPK2Q86TB3 2170 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 CCDC63Q8NA47 563 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 OR56A1Q8NGH5 318 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 C10orf105Q8TEF2 133 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 HTRA1Q92743 480 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 FAM120BQ96EK7 910 aaKnown RBP13.94□□□□□ -0.18
HDDC2-203ENST00000608284 ZNF300Q96RE9 604 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-203ENST00000608284 CHODLQ9H9P2 273 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 NPAP1Q9NZP6 1156 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 CADP27708 2225 aa13.94□□□□□ -0.18
HDDC2-203ENST00000608284 A0A096LNT2 108 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TMEM114B3SHH9 223 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 CYP7B1O75881 506 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TFPIP10646 304 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 APOBEC3AP31941 199 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 FRKP42685 505 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 CCT3P49368 545 aaKnown RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 RNF144AP50876 292 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 MLC1Q15049 377 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TOMM34Q15785 309 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TIGD2Q4W5G0 525 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 SLC25A53Q5H9E4 307 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 DCST2Q5T1A1 773 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 BHLHB9Q6PI77 547 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TMPPEQ6ZT21 453 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 MTDHQ86UE4 582 aaKnown RBP13.93□□□□□ -0.18
HDDC2-203ENST00000608284 NATD1Q8N6N6 113 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 KLHDC3Q9BQ90 382 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 PIMREGQ9BSJ6 248 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TRMOQ9BU70 441 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 TAS2R16Q9NYV7 291 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 BAIAP2L1Q9UHR4 511 aa13.93□□□□□ -0.18
HDDC2-203ENST00000608284 NPIPA5A0A0B4J1W7 369 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 NPIPA7E9PJI5 369 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 NDUFS8O00217 210 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 SMAD9O15198 467 aaKnown RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 GLRA3O75311 464 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 MRPL33O75394 65 aaKnown RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 IGHV3-9P01782 118 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 ABHD2P08910 425 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 NPIPA8P0DM63 369 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 SDC1P18827 310 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 MAPK1P28482 360 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 CCT5P48643 541 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 DIO1P49895 249 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 DNAJB13P59910 316 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 RPL38P63173 70 aaKnown RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 TGFBR3Q03167 851 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 MERTKQ12866 999 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 GGTLC2Q14390 218 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 PDK3Q15120 406 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 CARTPTQ16568 116 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 CCDC153Q494R4 210 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 IQCCQ4KMZ1 466 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 ZNF385BQ569K4 471 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 FAM120AOSQ5T036 256 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 ZNF540Q8NDQ6 660 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 SLC25A43Q8WUT9 341 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 OR5P2Q8WZ92 322 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 ST8SIA1Q92185 356 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 MOAP1Q96BY2 351 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 PRPF18Q99633 342 aaKnown RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 PSMC3IPQ9P2W1 217 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 UPB1Q9UBR1 384 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 ING1Q9UK53 422 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-203ENST00000608284 FIS1Q9Y3D6 152 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 SLC25A15Q9Y619 301 aa13.92□□□□□ -0.18
HDDC2-203ENST00000608284 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.91□□□□□ -0.182e-12■■■□□ 18.1
HDDC2-203ENST00000608284 NPIPB8E9PQR5 432 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 AZIN1O14977 448 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 OIP5O43482 229 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 KIAA0513O60268 411 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 APEHP13798 732 aaKnown RBP13.91□□□□□ -0.18
HDDC2-203ENST00000608284 PGCP20142 388 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 EFNA1P20827 205 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-203ENST00000608284 PDE7AQ13946 482 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 GALNTL6Q49A17 601 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 C1QTNF12Q5T7M4 302 aa13.91□□□□□ -0.18
HDDC2-203ENST00000608284 CLEC6AQ6EIG7 209 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms