RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CSTAP01040 98 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 SERPINE1P05121 402 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 GUSBP08236 651 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 MYZAPP0CAP1 466 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 OR12D1P0DN82 309 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 UQCRC2P22695 453 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 IL32P24001 234 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 SLC7A1P30825 629 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 PGM1P36871 562 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 OR3A2P47893 321 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 RPL14P50914 215 aaKnown RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 CCR4P51679 360 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 RASGEF1BQ0VAM2 473 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 SELENBP1Q13228 472 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 CAPRIN1Q14444 709 aaKnown RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 TAB1Q15750 504 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 MAPK14Q16539 360 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 TIGD2Q4W5G0 525 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 NCMAPQ5T1S8 102 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 HEPHL1Q6MZM0 1159 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 ADAM5Q6NVV9 412 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 WDR93Q6P2C0 686 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 TMPPEQ6ZT21 453 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 TMCO5AQ8N6Q1 288 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 OR4A15Q8NGL6 344 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 ST8SIA1Q92185 356 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 ZNF75CPQ92670 426 aaPredicted RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 KISS1RQ969F8 398 aaPredicted RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 ZNF775Q96BV0 537 aaPredicted RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 ZG16BQ96DA0 208 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 OR5B2Q96R09 309 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 SORT1Q99523 831 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 USB1Q9BQ65 265 aaKnown RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 PSD2Q9BQI7 771 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 TACO1Q9BSH4 297 aaKnown RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 DPY30Q9C005 99 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 ZNF350Q9GZX5 532 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 QRSL1Q9H0R6 528 aaKnown RBP6.76□□□□□ -1.33
CUX1-219ENST00000606749 NGBQ9NPG2 151 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 SERINC1Q9NRX5 453 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 EXD2Q9NVH0 621 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 KLHL9Q9P2J3 617 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 LAMP3Q9UQV4 416 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 RAP2CQ9Y3L5 183 aa6.76□□□□□ -1.33
CUX1-219ENST00000606749 FREM1Q5H8C1 2179 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 RNF103-CHMP3A0A140T963 221 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 DPRXA6NFQ7 191 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ZNF724A8MTY0 619 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 OVOL3O00110 214 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 SULT2B1O00204 365 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 SMAD9O15198 467 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 RGS16O15492 202 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 BCAS1O75363 584 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 SNUPNO95149 360 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 H6PDO95479 791 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 CPSF4O95639 269 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 AGR2O95994 175 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 CD3EP07766 207 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 DANCRP0C864 163 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 UBTFL6P0CB48 400 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 DHRS4L1P0CG22 281 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 PGCP20142 388 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 EDNRAP25101 427 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 APOBEC1P41238 236 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 SLC1A6P48664 564 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 DIO1P49895 249 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ATP5J2P56134 94 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 MERTKQ12866 999 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 MPP2Q14168 576 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 CASP8Q14790 479 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 KRT71Q3SY84 523 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ATAD3BQ5T9A4 648 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ANXA8L1Q5VT79 327 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 SAXO2Q658L1 398 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 TYW3Q6IPR3 259 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 C3orf33Q6P1S2 294 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 TNFAIP8L2Q6P589 184 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 SEZ6L2Q6UXD5 910 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 DNAJC14Q6Y2X3 702 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 Q6ZT83 130 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 EIF3MQ7L2H7 374 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 BHLHA15Q7RTS1 189 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 C16orf62Q7Z3J2 963 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ATG4DQ86TL0 474 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 MTDHQ86UE4 582 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 ANKRD46Q86W74 232 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ZNF619Q8N2I2 560 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 MREGQ8N565 214 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 FAM71CQ8NEG0 241 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 VPS37AQ8NEZ2 397 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 PIWIL2Q8TC59 973 aaKnown RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 OIT3Q8WWZ8 545 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 TMEM234Q8WY98 164 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 RAB8BQ92930 207 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 TESCQ96BS2 214 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ROPN1LQ96C74 230 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 SLC35G5Q96KT7 338 aa6.75□□□□□ -1.33
CUX1-219ENST00000606749 ZNF300Q96RE9 604 aaPredicted RBP6.75□□□□□ -1.33
CUX1-219ENST00000606749 CCDC106Q9BWC9 280 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms