RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 OR52A5Q9H2C5 316 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 C1orf198Q9H425 327 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 METTL8Q9H825 291 aaKnown RBP4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 SGK2Q9HBY8 427 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 CTPS2Q9NRF8 586 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 SEC14L4Q9UDX3 406 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 GPR132Q9UNW8 380 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 GOLT1BQ9Y3E0 138 aa4.65□□□□□ -1.67
SPTBN1-206ENST00000602898 COL11A2P13942 1736 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3KA0A087X1G2 549 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 A0A0U1RQS6 177 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SERPINE3A8MV23 424 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CHP2O43745 196 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 RAD1O60671 282 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 GADD45GO95257 159 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 MED26O95402 600 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CBX7O95931 251 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 MT-CYBP00156 380 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ERCC1P07992 297 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 DPEP1P16444 411 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PSMB5P28074 263 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 AQP2P41181 271 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PRKAG1P54619 331 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 GABARAPL2P60520 117 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TSPAN31Q12999 210 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 USF2Q15853 346 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CYP1B1Q16678 543 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CHRFAM7AQ494W8 412 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM196Q5HYL7 178 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 DNLZQ5SXM8 178 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TEDDM1Q5T9Z0 273 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PRAMEF18Q5VWM3 479 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PMS2CLQ68D20 193 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 REP15Q6BDI9 236 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SHFQ7M4L6 423 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SMIM15Q7Z3B0 74 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 LRRC18Q8N456 261 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 C11orf44Q8N8P7 122 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 OR10A7Q8NGE5 316 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 FAR1Q8WVX9 515 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM143Q96AN5 459 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC45A3Q96JT2 553 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 FOXN4Q96NZ1 517 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 COL21A1Q96P44 957 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SORCS2Q96PQ0 1159 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CD180Q99467 661 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 RBBP8Q99708 897 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 MAPKAP1Q9BPZ7 522 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TKTL2Q9H0I9 626 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 KCNK15Q9H427 330 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CARS2Q9HA77 564 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC28A3Q9HAS3 691 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 VAPAQ9P0L0 249 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 GHRLQ9UBU3 117 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 UBE2J1Q9Y385 318 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 RNF115Q9Y4L5 304 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 UBR2Q8IWV8 1755 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 NCANO14594 1321 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 MAGEB17A8MXT2 336 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PRR33A8MZF0 331 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 MCIDASD6RGH6 385 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 F8W735 103 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM189-UBE2V1I3L0A0 370 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 M0QZK8 103 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 PPP6CO00743 305 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 INSIG1O15503 277 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ITGB2P05107 769 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 BMP3P12645 472 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 FOSL2P15408 326 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 RPL10P27635 214 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 NDUFS1P28331 727 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 GABRA5P31644 462 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 APOBEC3AP31941 199 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CHI3L1P36222 383 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 POLR2IP36954 125 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 COMPP49747 757 aaPredicted RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 LIMK2P53671 638 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 EXOSC2Q13868 293 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ARL6IP1Q15041 203 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 GXYLT1Q4G148 440 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CBWD6Q4V339 395 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SBK1Q52WX2 424 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 CBWD3Q5JTY5 395 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM69BQ5VUD6 431 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ANKRD22Q5VYY1 191 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 RBMS3Q6XE24 437 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM183BPQ6ZVS7 135 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ZC3H3Q8IXZ2 948 aaKnown RBP4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 HS3ST5Q8IZT8 346 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM132CQ8N3T6 1108 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ADPRHL1Q8NDY3 354 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 OR5T3Q8NGG3 340 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 MCFD2Q8NI22 146 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 ITFG1Q8TB96 612 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC2A12Q8TD20 617 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 NEK7Q8TDX7 302 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 UBTD2Q8WUN7 234 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 AP3S1Q92572 193 aa4.64□□□□□ -1.67
SPTBN1-206ENST00000602898 TMBIM1Q969X1 311 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms