RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MICU1Q9BPX6 476 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GON7Q9BXV9 100 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 METTL17Q9H7H0 456 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 DZANK1Q9NVP4 752 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 HIF1ANQ9NWT6 349 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 A6NIN4 97 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 OTX2P32243 289 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SPOCK1Q08629 439 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SLC14A1Q13336 389 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 IL1F10Q8WWZ1 152 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 TSACCQ96A04 125 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SORCS2Q96PQ0 1159 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 BOCQ9BWV1 1114 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF337Q9Y3M9 751 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 RNF212BA8MTL3 300 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 CD79AP11912 226 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 HABP2Q14520 560 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 HYAL4Q2M3T9 481 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 ACSM3Q53FZ2 586 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GPRIN1Q7Z2K8 1008 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 ABHD12BQ7Z5M8 362 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GIMAP1Q8WWP7 306 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 NMNAT2Q9BZQ4 307 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SLC6A14Q9UN76 642 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 CA5BQ9Y2D0 317 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 TEX51A0A1B0GUA7 166 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 A0A1B0GVG6 124 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 KRBOX1C9JBD0 128 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GRM7Q14831 915 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SPCS2Q15005 226 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 MPEG1Q2M385 716 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 PLCXD3Q63HM9 321 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 TMEM151BQ8IW70 566 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GPR174Q9BXC1 333 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 FAM212BQ9NTI7 297 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 POLHQ9Y253 713 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 TOR1AO14656 332 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GPR32O75388 356 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 HTR3AP46098 478 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SLC6A8P48029 635 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 RNF4P78317 190 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 EMX1Q04741 257 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 DUSP7Q16829 419 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 OCSTAMPQ9BR26 566 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 QPCTLQ9NXS2 382 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 PTTG3PQ9NZH4 202 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SURF4O15260 269 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SERPINF1P36955 418 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 GATMP50440 423 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 MSMO1Q15800 293 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 CLVS2Q5SYC1 327 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 IDO2Q6ZQW0 420 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 CDRT4Q8N9R6 151 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 OR5H6Q8NGV6 325 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 RADILQ96JH8 1075 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 FCRL1Q96LA6 429 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF300Q96RE9 604 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 SLC45A1Q9Y2W3 748 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 CEPT1Q9Y6K0 416 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 MYO16Q9Y6X6 1858 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 A6NHS1 94 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 CACNG3O60359 315 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 M6PRP20645 277 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 NPBWR1P48145 328 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 PDLIM3Q53GG5 364 aaPredicted RBP9.03□□□□□ -0.96
CSMD1-217ENST00000602723 FTSJ1Q9UET6 329 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 V9GY05 133 aa9.03□□□□□ -0.96
CSMD1-217ENST00000602723 DOCK3Q8IZD9 2030 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 WDR5P61964 334 aaKnown RBP9.02□□□□□ -0.96
CSMD1-217ENST00000602723 TLE1Q04724 770 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 YIF1BQ5BJH7 314 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 CYS1Q717R9 158 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 CD163Q86VB7 1156 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 NPAP1Q9NZP6 1156 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 C2orf78A6NCI8 922 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 A6NCN8 305 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 ZNF840PA6NDX5 716 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 NCR1O76036 304 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 IL1AP01583 271 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 CD53P19397 219 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 TNFSF4P23510 183 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 GABRA5P31644 462 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 CXCR4P61073 352 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 PITX1P78337 314 aaPredicted RBP9.02□□□□□ -0.96
CSMD1-217ENST00000602723 MRPS34P82930 218 aaKnown RBP9.02□□□□□ -0.96
CSMD1-217ENST00000602723 TANGO2Q6ICL3 276 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 ZBTB8AQ96BR9 441 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 SLC30A3Q99726 388 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 TCEAL2Q9H3H9 227 aaPredicted RBP9.02□□□□□ -0.96
CSMD1-217ENST00000602723 DNAJB11Q9UBS4 358 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 MPDZO75970 2070 aa9.02□□□□□ -0.96
CSMD1-217ENST00000602723 C20orf202A1L168 122 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 LATO43561 262 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 RPS18P62269 152 aaKnown RBP9.02□□□□□ -0.97
CSMD1-217ENST00000602723 CPZQ66K79 652 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 PGAP1Q75T13 922 aa9.02□□□□□ -0.97
CSMD1-217ENST00000602723 KIAA0907Q7Z7F0 614 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms