RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 CBFBQ13951 182 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 CRTC2Q53ET0 693 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-212ENST00000602086 ALG10BQ5I7T1 473 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-212ENST00000602086 RASSF6Q6ZTQ3 369 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 TMPRSS11FQ6ZWK6 438 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 GALNT5Q7Z7M9 940 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 MARCH3Q86UD3 253 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 CLDN22Q8N7P3 220 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 B4GALNT2Q8NHY0 566 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 SGCZQ96LD1 299 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 FRMD6Q96NE9 622 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 MUS81Q96NY9 551 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 APOL4Q9BPW4 351 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 ADAM19Q9H013 955 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 GPN2Q9H9Y4 310 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-212ENST00000602086 MED31Q9Y3C7 131 aa13.14□□□□□ -0.31
ZNF548-212ENST00000602086 ZZEF1O43149 2961 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 ANKRD33BA6NCL7 494 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 ZAR1LA6NP61 321 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-212ENST00000602086 OIP5O43482 229 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 HCRTR2O43614 444 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 CDC40O60508 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZNF548-212ENST00000602086 TNFAIP8O95379 198 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 LYNP07948 512 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 CELA2AP08217 269 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 RPSAP08865 295 aaKnown RBP13.13□□□□□ -0.31
ZNF548-212ENST00000602086 POLR2IP36954 125 aaKnown RBP13.13□□□□□ -0.31
ZNF548-212ENST00000602086 Q0VFX4 171 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 AIMP2Q13155 320 aaKnown RBP13.13□□□□□ -0.31
ZNF548-212ENST00000602086 DESI1Q6ICB0 168 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 CBLN3Q6UW01 205 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 WDR88Q6ZMY6 472 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 CDK20Q8IZL9 346 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 SLC43A2Q8N370 569 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 TMEM255BQ8WV15 326 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 ASB15Q8WXK1 588 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 GTPBP3Q969Y2 492 aaKnown RBP13.13□□□□□ -0.31
ZNF548-212ENST00000602086 C3orf49Q96BT1 292 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 FER1L6-AS2Q96M78 137 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 TMEM43Q9BTV4 400 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 RTN4RQ9BZR6 473 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 SH2D2AQ9NP31 389 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 GMPPBQ9Y5P6 360 aa13.13□□□□□ -0.31
ZNF548-212ENST00000602086 PCSK5Q92824 1860 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 TP53P04637 393 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-212ENST00000602086 GGT2P36268 569 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 PTGDSP41222 190 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 SOX3P41225 446 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 IDH2P48735 452 aaKnown RBP13.12□□□□□ -0.31
ZNF548-212ENST00000602086 RNF144AP50876 292 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-212ENST00000602086 SOX8P57073 446 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 ISL1P61371 349 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 IL1RL1Q01638 556 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 MEP1AQ16819 746 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 NDUFAF6Q330K2 333 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 DCAF10Q5QP82 559 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 TTC33Q6PID6 262 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-212ENST00000602086 ATG4DQ86TL0 474 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-212ENST00000602086 NRMQ8IXM6 262 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 CADM2Q8N3J6 435 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 GATSQ8NAP1 163 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 PAQR8Q8TEZ7 354 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 THAP4Q8WY91 577 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 ST8SIA1Q92185 356 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 NXPE2Q96DL1 559 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 ATP13A2Q9NQ11 1180 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 CNIH4Q9P003 139 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 CHCHD2Q9Y6H1 151 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-212ENST00000602086 PKD1L2Q7Z442 2459 aa13.12□□□□□ -0.31
ZNF548-212ENST00000602086 TRIM64A6NGJ6 449 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 SCO2O43819 266 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 MPZL2O60487 215 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 POU2F1P14859 743 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 CHMP24386 653 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 CASP3P42574 277 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 HTR3AP46098 478 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 MAP2K6P52564 334 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 CXCR4P61073 352 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 TOP3AQ13472 1001 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-212ENST00000602086 RAPSNQ13702 412 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 PTGES3Q15185 160 aaKnown RBP13.11□□□□□ -0.31
ZNF548-212ENST00000602086 COL28A1Q2UY09 1125 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 KCTD21Q4G0X4 260 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 SLX4IPQ5VYV7 408 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 MARCH9Q86YJ5 346 aa13.11□□□□□ -0.31
ZNF548-212ENST00000602086 TMCO5AQ8N6Q1 288 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms