RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GUCY1A3Q02108 690 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 QPRTQ15274 297 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 AGKQ53H12 422 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 RUNDC3AQ59EK9 446 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 COQ5Q5HYK3 327 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 OR2A2Q6IF42 318 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 DNAJC14Q6Y2X3 702 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 NET1Q7Z628 596 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ADGRG3Q86Y34 549 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 LILRA2Q8N149 483 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 OR10D3Q8NH80 312 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 OR2V1Q8NHB1 315 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 PNPT1Q8TCS8 783 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 RNF128Q8TEB7 428 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 C10orf82Q8WW14 230 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 RNASE6Q93091 150 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 INTS12Q96CB8 462 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 CHMP6Q96FZ7 201 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 LURAP1Q96LR2 239 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 THUMPD3Q9BV44 507 aaKnown RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 TMEM120AQ9BXJ8 343 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 PIGMQ9H3S5 423 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 SLC24A3Q9HC58 644 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 MCCC2Q9HCC0 563 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 GP6Q9HCN6 339 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 PLSCR4Q9NRQ2 329 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.87□□□□□ -1.15
SSBP4-208ENST00000600628 FGFR1OP2Q9NVK5 253 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 CALML5Q9NZT1 146 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 STOML1Q9UBI4 398 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 P2RX2Q9UBL9 471 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 DCTN4Q9UJW0 460 aa7.87□□□□□ -1.15
SSBP4-208ENST00000600628 ROS1P08922 2347 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 A0A0G2JND7 137 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 GTPBP1O00178 669 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 DYNC1I1O14576 645 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 SS18L1O75177 396 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 GCM2O75603 506 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PGM3O95394 542 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 DBIP07108 87 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 UBTFL6P0CB48 400 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PGCP20142 388 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PPIBP23284 216 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ADSLP30566 484 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PEX19P40855 299 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 APOBEC1P41238 236 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 CLK1P49759 484 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 MAP2K6P52564 334 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 CRISP3P54108 245 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 KRTAP10-9P60411 292 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 RAC3P60763 192 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 H3F3AP84243 136 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 TLE4Q04727 773 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 EPS8Q12929 822 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 SELENBP1Q13228 472 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 DAZAP2Q15038 168 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PON3Q15166 354 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ZNF239Q16600 458 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ZSWIM7Q19AV6 140 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 GPAT3Q53EU6 434 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 C6orf10Q5SRN2 563 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 MRPL2Q5T653 305 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 VWA1Q6PCB0 445 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ZNF474Q6S9Z5 364 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PLEKHM3Q6ZWE6 761 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 FAM214BQ7L5A3 538 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 BTLAQ7Z6A9 289 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 COMTD1Q86VU5 262 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PTOV1Q86YD1 416 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 UBQLNLQ8IYU4 475 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 GCNT2Q8N0V5 402 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 THOC1Q96FV9 657 aaKnown RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 TMEM19Q96HH6 336 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 GMPPAQ96IJ6 420 aaPredicted RBP7.86□□□□□ -1.15
SSBP4-208ENST00000600628 KLHL15Q96M94 604 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ANKRD27Q96NW4 1050 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 PINK1Q9BXM7 581 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 SRXN1Q9BYN0 137 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 RAD21L1Q9H4I0 556 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 SAR1AQ9NR31 198 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 MRGBPQ9NV56 204 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 KLHL14Q9P2G3 628 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 TRIM33Q9UPN9 1127 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ALPK2Q86TB3 2170 aa7.86□□□□□ -1.15
SSBP4-208ENST00000600628 ITPR3Q14573 2671 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 ENO4A6NNW6 628 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 NR5A2O00482 541 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 EIF1AYO14602 144 aaKnown RBP7.85□□□□□ -1.15
SSBP4-208ENST00000600628 AP3D1O14617 1153 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 TNFSF11O14788 317 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 SLC22A2O15244 555 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 SEC14L5O43304 696 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 CXCL13O43927 109 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 GMFGO60234 142 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 NPIPB7O75200 414 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 NPPAP01160 153 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 BCHEP06276 602 aa7.85□□□□□ -1.15
SSBP4-208ENST00000600628 NR2F1P10589 423 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms